G139679


Basic Information

Item Value
gene id G139679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38267994 ~ 38268410 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU160626
gcagaacactgacattcctgtcttgcaggaaatcacacatagaatgagcagcatggctggtggcattgtcatgctggagggtcatgtcaggaggagcctgcaggaagggtaccacatgaggaaggaggatgtcttccctgtaatgcacagcattgagattgcctgcactgacaacaagctcagtccgatgatgctgtgacacaccgctccaaaccatgatggaccctctaccttcaaatcgatcccactccagagtacaggcctcggtgtaacgctcattccttcgatgatacgtaaacgcgaatccaaccatcacccctggtgagacaaaaccacgactcgtcagtgaagagcactttttgccagtcctgtctggtccagtgacggtgggtttgtgcccattggcGACGTTGTtcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160626 True 417 lncRNA 0.52 1 38267994 38268410

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 356664 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 377484 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 504279 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 603701 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 646119 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 449882 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 488823 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 521126 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 555175 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 586772 38855182 ~ 38857226 (+)
G139598 NA non-coding upstream 54458 38213240 ~ 38213536 (+)
G139452 NA non-coding upstream 154766 38112988 ~ 38113228 (+)
G139191 NA non-coding upstream 203978 38063769 ~ 38064016 (+)
G139181 NA non-coding upstream 214564 38053142 ~ 38053430 (+)
G139180 NA non-coding upstream 215294 38052349 ~ 38052700 (+)
G139681 NA non-coding downstream 335 38268745 ~ 38269044 (+)
G139685 NA non-coding downstream 3113 38271523 ~ 38271735 (+)
G139738 NA non-coding downstream 45064 38313474 ~ 38313749 (+)
G139741 NA non-coding downstream 47401 38315811 ~ 38316028 (+)
G139750 NA non-coding downstream 57552 38325962 ~ 38326312 (+)
G139179 NA other upstream 216250 38051359 ~ 38051744 (+)
G139101 NA other upstream 323982 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 327280 37919735 ~ 37940714 (+)
G139004 NA other upstream 443984 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1866023 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 3270885 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3699964 41968374 ~ 41969317 (+)
G144661 NA other downstream 4241920 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5462462 43730872 ~ 43731218 (+)
G146091 NA other downstream 5500297 43768707 ~ 43769162 (+)

Expression


Co-expression Network