G139685



Basic Information


Item Value
gene id G139685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38271523 ~ 38271735 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU160632
gggcaacccccacgggaacctttccccagTAGAATCTTTCCCCCATGGGAATCACACCTGTTGgaattctcacaaacaatcgcaacagtgtttcaataatatatagaacttttctcacagctctggtatataaagcttttttgaggccttgctcacaattcattctgtggcagcacaatgaccaaacaatatactgtatgtgaggctcttgat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU160632 True 213 lncRNA 0.40 1 38271523 38271735
Loading

Neighbor


gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 360193 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 381013 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 507808 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 607230 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 649648 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 446557 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 485498 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 517801 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 551850 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 583447 38855182 ~ 38857226 (+)
G139681 NA non-coding upstream 2479 38268745 ~ 38269044 (+)
G139679 NA non-coding upstream 3113 38267994 ~ 38268410 (+)
G139598 NA non-coding upstream 57987 38213240 ~ 38213536 (+)
G139452 NA non-coding upstream 158295 38112988 ~ 38113228 (+)
G139191 NA non-coding upstream 207507 38063769 ~ 38064016 (+)
G139738 NA non-coding downstream 41739 38313474 ~ 38313749 (+)
G139741 NA non-coding downstream 44076 38315811 ~ 38316028 (+)
G139750 NA non-coding downstream 54227 38325962 ~ 38326312 (+)
G139751 NA non-coding downstream 54654 38326389 ~ 38326760 (+)
G139785 NA non-coding downstream 76737 38348472 ~ 38348778 (+)
G139179 NA other upstream 219779 38051359 ~ 38051744 (+)
G139101 NA other upstream 327511 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 330809 37919735 ~ 37940714 (+)
G139004 NA other upstream 447513 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1869552 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 3267560 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3696639 41968374 ~ 41969317 (+)
G144661 NA other downstream 4238595 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5459137 43730872 ~ 43731218 (+)
G146091 NA other downstream 5496972 43768707 ~ 43769162 (+)

Expression


G139685 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

G139685 Expression in each Bioproject

Bar chart with 15 bars.
G139685 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network