G139741


Basic Information

Item Value
gene id G139741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38315811 ~ 38316028 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU160690
gacctgcagtgcctagctccactcctactccccagctgctctcatttgttgacttctgtaaccgtaaaatccttggtttcatgcatgttaacattagaactccctaagtttgctttattcattgctttagcacattctgccaacccagatgtcttgaatcctggcttaggtaaaccaccaaaaaccctgaaatttccatccctaactaacattttctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160690 True 218 lncRNA 0.40 1 38315811 38316028

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 404481 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 425301 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 552096 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 651518 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 693936 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 402264 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 441205 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 473508 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 507557 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 539154 38855182 ~ 38857226 (+)
G139738 NA non-coding upstream 2062 38313474 ~ 38313749 (+)
G139685 NA non-coding upstream 44076 38271523 ~ 38271735 (+)
G139681 NA non-coding upstream 46767 38268745 ~ 38269044 (+)
G139679 NA non-coding upstream 47401 38267994 ~ 38268410 (+)
G139598 NA non-coding upstream 102275 38213240 ~ 38213536 (+)
G139750 NA non-coding downstream 9934 38325962 ~ 38326312 (+)
G139751 NA non-coding downstream 10361 38326389 ~ 38326760 (+)
G139785 NA non-coding downstream 32444 38348472 ~ 38348778 (+)
G139826 LOC106605119 non-coding downstream 63220 38379248 ~ 38383209 (+)
G140175 NA non-coding downstream 313903 38629931 ~ 38630226 (+)
G139179 NA other upstream 264067 38051359 ~ 38051744 (+)
G139101 NA other upstream 371799 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 375097 37919735 ~ 37940714 (+)
G139004 NA other upstream 491801 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1913840 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 3223267 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3652346 41968374 ~ 41969317 (+)
G144661 NA other downstream 4194302 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5414844 43730872 ~ 43731218 (+)
G146091 NA other downstream 5452679 43768707 ~ 43769162 (+)

Expression


Co-expression Network