G140196


Basic Information

Item Value
gene id G140196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38642382 ~ 38642697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161170
ACCCGCAGCCATCTTTGTGGTAGTAATTGGAGATGCTAAATTGCTGTGGTCTGGCAGGATAGGTCCATTCTGTTAATTACAGTACCTGttaaaagtttggatacacctactcattcaagggtttttctgtatttttactattttctacattgtagaataatagtgaagacatcaaaactatgaaataacacatatggaataatttagtaaccaaaagtgtttaACAGATTGCGACtgcacaatcacccaacctcaacccaattgcgaTGGGAtgggttggaccgcagagtaaagaaaaagcagccaacaagtgctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161170 True 316 lncRNA 0.37 1 38642382 38642697

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 731052 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 751872 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 878667 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 978089 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 1020507 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 75595 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 114536 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 146839 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 180888 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 212485 38855182 ~ 38857226 (+)
G140192 NA non-coding upstream 2586 38639313 ~ 38639796 (+)
G140175 NA non-coding upstream 12156 38629931 ~ 38630226 (+)
G139826 LOC106605119 non-coding upstream 259173 38379248 ~ 38383209 (+)
G139785 NA non-coding upstream 293604 38348472 ~ 38348778 (+)
G139751 NA non-coding upstream 315622 38326389 ~ 38326760 (+)
G140198 NA non-coding downstream 1146 38643843 ~ 38644077 (+)
G140205 NA non-coding downstream 9261 38651958 ~ 38652203 (+)
G140212 NA non-coding downstream 16682 38659379 ~ 38659620 (+)
G140214 NA non-coding downstream 17249 38659946 ~ 38660212 (+)
G140264 NA non-coding downstream 56734 38699431 ~ 38699745 (+)
G139179 NA other upstream 590638 38051359 ~ 38051744 (+)
G139101 NA other upstream 698370 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 701668 37919735 ~ 37940714 (+)
G139004 NA other upstream 818372 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2240411 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2896598 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3325677 41968374 ~ 41969317 (+)
G144661 NA other downstream 3867633 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5088175 43730872 ~ 43731218 (+)
G146091 NA other downstream 5126010 43768707 ~ 43769162 (+)

Expression


Co-expression Network