Gene
RNA
| Item | Value |
|---|---|
| gene id | G140198 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38643843 ~ 38644077 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU161172 | True | 235 | lncRNA | 0.38 | 1 | 38643843 | 38644077 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sh3d21 | LOC106605124 | coding | upstream | 732513 | 37891951 ~ 37911330 (+) |
| LOC110489035 | LOC106605126 | coding | upstream | 753333 | 37863201 ~ 37890510 (+) |
| LOC110501519 | LOC106605129 | coding | upstream | 880128 | 37699215 ~ 37763715 (+) |
| LOC110489000 | LOC106605130 | coding | upstream | 979550 | 37628152 ~ 37664293 (+) |
| LOC110488991 | LOC106605131 | coding | upstream | 1021968 | 37607093 ~ 37621875 (+) |
| LOC110489135 | LOC106605117 | coding | downstream | 74215 | 38718292 ~ 38734398 (+) |
| LOC110489149 | LOC106605176 | coding | downstream | 113156 | 38757233 ~ 38786447 (+) |
| LOC110489163 | LOC106605115 | coding | downstream | 145459 | 38789536 ~ 38823441 (+) |
| LOC110489178 | LOC106605114 | coding | downstream | 179508 | 38823585 ~ 38847695 (+) |
| LOC110533769 | LOC106583263 | coding | downstream | 211105 | 38855182 ~ 38857226 (+) |
| G140196 | NA | non-coding | upstream | 1146 | 38642382 ~ 38642697 (+) |
| G140192 | NA | non-coding | upstream | 4047 | 38639313 ~ 38639796 (+) |
| G140175 | NA | non-coding | upstream | 13617 | 38629931 ~ 38630226 (+) |
| G139826 | LOC106605119 | non-coding | upstream | 260634 | 38379248 ~ 38383209 (+) |
| G139785 | NA | non-coding | upstream | 295065 | 38348472 ~ 38348778 (+) |
| G140205 | NA | non-coding | downstream | 7881 | 38651958 ~ 38652203 (+) |
| G140212 | NA | non-coding | downstream | 15302 | 38659379 ~ 38659620 (+) |
| G140214 | NA | non-coding | downstream | 15869 | 38659946 ~ 38660212 (+) |
| G140264 | NA | non-coding | downstream | 55354 | 38699431 ~ 38699745 (+) |
| G140271 | NA | non-coding | downstream | 63002 | 38707079 ~ 38707308 (+) |
| G139179 | NA | other | upstream | 592099 | 38051359 ~ 38051744 (+) |
| G139101 | NA | other | upstream | 699831 | 37943742 ~ 37944012 (+) |
| G139089 | LOC106605123 | other | upstream | 703129 | 37919735 ~ 37940714 (+) |
| G139004 | NA | other | upstream | 819833 | 37777061 ~ 37824010 (+) |
| LOC110488849 | LOC106605147 | other | upstream | 2241872 | 36354883 ~ 36405310 (+) |
| LOC110489834 | eny2 | other | downstream | 2895218 | 41539240 ~ 41541654 (+) |
| G143938 | LOC106605049 | other | downstream | 3324297 | 41968374 ~ 41969317 (+) |
| G144661 | NA | other | downstream | 3866253 | 42510330 ~ 42566030 (+) |
| G146054 | LOC100136012 | other | downstream | 5086795 | 43730872 ~ 43731218 (+) |
| G146091 | NA | other | downstream | 5124630 | 43768707 ~ 43769162 (+) |
