G140212


Basic Information

Item Value
gene id G140212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38659379 ~ 38659620 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161186
catgttgtccagtcctctggcagtctctatgggggtgccacagggttcaattctcgggccgactcttttctctgtatatattaatgatgttgctcttgctgcgggcgattccctgatccacctctacgcagacgacaccattctgtatacttccggcccttccttggacactgtgctatctaacctccaaacgagcttcaacgccatacaacactccttccgtggcctccaactgctcttaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU161186 True 242 lncRNA 0.55 1 38659379 38659620

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 748049 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 768869 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 895664 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 995086 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 1037504 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 58672 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 97613 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 129916 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 163965 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 195562 38855182 ~ 38857226 (+)
G140205 NA non-coding upstream 7176 38651958 ~ 38652203 (+)
G140198 NA non-coding upstream 15302 38643843 ~ 38644077 (+)
G140196 NA non-coding upstream 16682 38642382 ~ 38642697 (+)
G140192 NA non-coding upstream 19583 38639313 ~ 38639796 (+)
G140175 NA non-coding upstream 29153 38629931 ~ 38630226 (+)
G140214 NA non-coding downstream 326 38659946 ~ 38660212 (+)
G140264 NA non-coding downstream 39811 38699431 ~ 38699745 (+)
G140271 NA non-coding downstream 47459 38707079 ~ 38707308 (+)
G140318 NA non-coding downstream 191287 38850907 ~ 38852062 (+)
G139179 NA other upstream 607635 38051359 ~ 38051744 (+)
G139101 NA other upstream 715367 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 718665 37919735 ~ 37940714 (+)
G139004 NA other upstream 835369 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2257408 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2879675 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3308754 41968374 ~ 41969317 (+)
G144661 NA other downstream 3850710 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5071252 43730872 ~ 43731218 (+)
G146091 NA other downstream 5109087 43768707 ~ 43769162 (+)

Expression


Co-expression Network