G140271


Basic Information

Item Value
gene id G140271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38707079 ~ 38707308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161248
aatccagaaaatcacattgtaggattttttatgaatttatttgcaaattatggtggaaaataagtatttggtcacctacaaacacgcaagatttctgtctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcgttacctgtattaatggcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagtcacactcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161248 True 230 lncRNA 0.38 1 38707079 38707308

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 795749 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 816569 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 943364 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 1042786 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 1085204 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 10984 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 49925 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 82228 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 116277 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 147874 38855182 ~ 38857226 (+)
G140264 NA non-coding upstream 7334 38699431 ~ 38699745 (+)
G140214 NA non-coding upstream 46867 38659946 ~ 38660212 (+)
G140212 NA non-coding upstream 47459 38659379 ~ 38659620 (+)
G140205 NA non-coding upstream 54876 38651958 ~ 38652203 (+)
G140198 NA non-coding upstream 63002 38643843 ~ 38644077 (+)
G140318 NA non-coding downstream 143599 38850907 ~ 38852062 (+)
LOC110489269 LOC106605108 non-coding downstream 154199 38861507 ~ 38973957 (+)
G140363 LOC106605107 non-coding downstream 245527 38952835 ~ 38963883 (+)
G140325 NA non-coding downstream 266764 38974072 ~ 38974620 (+)
G139179 NA other upstream 655335 38051359 ~ 38051744 (+)
G139101 NA other upstream 763067 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 766365 37919735 ~ 37940714 (+)
G139004 NA other upstream 883069 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2305108 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2831987 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3261066 41968374 ~ 41969317 (+)
G144661 NA other downstream 3803022 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5023564 43730872 ~ 43731218 (+)
G146091 NA other downstream 5061399 43768707 ~ 43769162 (+)

Expression


Co-expression Network