Gene
RNA
| Item | Value |
|---|---|
| gene id | G140466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38789568 ~ 38790938 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| type II inositol 1,4,5-trisphosphate 5-phosphatase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU161461 | True | 385 | lncRNA | 0.45 | 2 | 38789568 | 38790938 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489143 | LOC106605116 | coding | downstream | 38339 | 38738678 ~ 38779271 (-) |
| LOC110489131 | LOC106605119 | coding | downstream | 295227 | 38379192 ~ 38494341 (-) |
| LOC110489123 | LOC106605177 | coding | downstream | 702170 | 38086165 ~ 38087398 (-) |
| LOC110489095 | LOC106605120 | coding | downstream | 736204 | 38048897 ~ 38053364 (-) |
| LOC110489105 | LOC106605178 | coding | downstream | 741162 | 38046700 ~ 38048666 (-) |
| LOC110489186 | NA | coding | upstream | 61295 | 38852233 ~ 38854258 (-) |
| LOC110489192 | LOC106605112 | coding | upstream | 67568 | 38858506 ~ 38892046 (-) |
| LOC110489249 | LOC106605107 | coding | upstream | 161886 | 38952824 ~ 38963780 (-) |
| LOC110489261 | LOC106605105 | coding | upstream | 184667 | 38975605 ~ 38983972 (-) |
| LOC110489287 | LOC106605101 | coding | upstream | 406728 | 39197666 ~ 39209506 (-) |
| G140453 | NA | non-coding | downstream | 14651 | 38773985 ~ 38774917 (-) |
| G140227 | NA | non-coding | downstream | 120230 | 38669134 ~ 38669338 (-) |
| G140197 | NA | non-coding | downstream | 146982 | 38642303 ~ 38642586 (-) |
| G139784 | NA | non-coding | downstream | 441406 | 38347935 ~ 38348162 (-) |
| G140468 | NA | non-coding | upstream | 16030 | 38806968 ~ 38819055 (-) |
| G140470 | LOC106605115 | non-coding | upstream | 24620 | 38815558 ~ 38821894 (-) |
| G140478 | LOC106605114 | non-coding | upstream | 35344 | 38826282 ~ 38826817 (-) |
| G140480 | LOC100846954 | non-coding | upstream | 37318 | 38828256 ~ 38828523 (-) |
| G140481 | NA | non-coding | upstream | 37655 | 38828593 ~ 38828885 (-) |
| G139231 | NA | other | downstream | 1036610 | 37747441 ~ 37752958 (-) |
| LOC110501508 | LOC106605132 | other | downstream | 1325810 | 37442359 ~ 37463839 (-) |
| pnrc2 | LOC106605140 | other | downstream | 1940223 | 36844929 ~ 36849373 (-) |
| G138080 | NA | other | downstream | 1961171 | 36825792 ~ 36828397 (-) |
| G140479 | NA | other | upstream | 36971 | 38827909 ~ 38828195 (-) |
| G140879 | NA | other | upstream | 272924 | 39063862 ~ 39064418 (-) |
| G141363 | LOC106605077 | other | upstream | 972995 | 39763933 ~ 39765473 (-) |
| LOC110489653 | LOC106605072 | other | upstream | 1433684 | 40224622 ~ 40298333 (-) |
| G142918 | NA | other | upstream | 2072276 | 40863214 ~ 40863721 (-) |
