Gene
RNA
| Item | Value |
|---|---|
| gene id | G140480 |
| gene name | LOC100846954 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38828256 ~ 38828523 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU161481 | True | 268 | lncRNA | 0.49 | 1 | 38828256 | 38828523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489143 | LOC106605116 | coding | downstream | 77027 | 38738678 ~ 38779271 (-) |
| LOC110489131 | LOC106605119 | coding | downstream | 333915 | 38379192 ~ 38494341 (-) |
| LOC110489123 | LOC106605177 | coding | downstream | 740858 | 38086165 ~ 38087398 (-) |
| LOC110489095 | LOC106605120 | coding | downstream | 774892 | 38048897 ~ 38053364 (-) |
| LOC110489105 | LOC106605178 | coding | downstream | 779850 | 38046700 ~ 38048666 (-) |
| LOC110489186 | NA | coding | upstream | 23710 | 38852233 ~ 38854258 (-) |
| LOC110489192 | LOC106605112 | coding | upstream | 29983 | 38858506 ~ 38892046 (-) |
| LOC110489249 | LOC106605107 | coding | upstream | 124301 | 38952824 ~ 38963780 (-) |
| LOC110489261 | LOC106605105 | coding | upstream | 147082 | 38975605 ~ 38983972 (-) |
| LOC110489287 | LOC106605101 | coding | upstream | 369143 | 39197666 ~ 39209506 (-) |
| G140478 | LOC106605114 | non-coding | downstream | 1439 | 38826282 ~ 38826817 (-) |
| G140470 | LOC106605115 | non-coding | downstream | 6362 | 38815558 ~ 38821894 (-) |
| G140468 | NA | non-coding | downstream | 9201 | 38806968 ~ 38819055 (-) |
| G140466 | NA | non-coding | downstream | 37318 | 38789568 ~ 38790938 (-) |
| G140481 | NA | non-coding | upstream | 70 | 38828593 ~ 38828885 (-) |
| G140483 | LOC106583245 | non-coding | upstream | 4266 | 38832789 ~ 38833029 (-) |
| G140486 | NA | non-coding | upstream | 8920 | 38837443 ~ 38837669 (-) |
| G140490 | LOC106605114 | non-coding | upstream | 13159 | 38841682 ~ 38842212 (-) |
| G140491 | NA | non-coding | upstream | 14900 | 38843423 ~ 38843638 (-) |
| G140479 | NA | other | downstream | 61 | 38827909 ~ 38828195 (-) |
| G139231 | NA | other | downstream | 1075298 | 37747441 ~ 37752958 (-) |
| LOC110501508 | LOC106605132 | other | downstream | 1364498 | 37442359 ~ 37463839 (-) |
| pnrc2 | LOC106605140 | other | downstream | 1978911 | 36844929 ~ 36849373 (-) |
| G140879 | NA | other | upstream | 235339 | 39063862 ~ 39064418 (-) |
| G141363 | LOC106605077 | other | upstream | 935410 | 39763933 ~ 39765473 (-) |
| LOC110489653 | LOC106605072 | other | upstream | 1396099 | 40224622 ~ 40298333 (-) |
| G142918 | NA | other | upstream | 2034691 | 40863214 ~ 40863721 (-) |
| LOC110489860 | LOC106605053 | other | upstream | 2886023 | 41714269 ~ 41730507 (-) |
