Gene
RNA
| Item | Value |
|---|---|
| gene id | G140483 |
| gene name | LOC106583245 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38832789 ~ 38833029 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: metal regulatory transcription factor 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU161484 | True | 241 | lncRNA | 0.42 | 1 | 38832789 | 38833029 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489143 | LOC106605116 | coding | downstream | 81560 | 38738678 ~ 38779271 (-) |
| LOC110489131 | LOC106605119 | coding | downstream | 338448 | 38379192 ~ 38494341 (-) |
| LOC110489123 | LOC106605177 | coding | downstream | 745391 | 38086165 ~ 38087398 (-) |
| LOC110489095 | LOC106605120 | coding | downstream | 779425 | 38048897 ~ 38053364 (-) |
| LOC110489105 | LOC106605178 | coding | downstream | 784383 | 38046700 ~ 38048666 (-) |
| LOC110489186 | NA | coding | upstream | 19204 | 38852233 ~ 38854258 (-) |
| LOC110489192 | LOC106605112 | coding | upstream | 25477 | 38858506 ~ 38892046 (-) |
| LOC110489249 | LOC106605107 | coding | upstream | 119795 | 38952824 ~ 38963780 (-) |
| LOC110489261 | LOC106605105 | coding | upstream | 142576 | 38975605 ~ 38983972 (-) |
| LOC110489287 | LOC106605101 | coding | upstream | 364637 | 39197666 ~ 39209506 (-) |
| G140481 | NA | non-coding | downstream | 3904 | 38828593 ~ 38828885 (-) |
| G140480 | LOC100846954 | non-coding | downstream | 4266 | 38828256 ~ 38828523 (-) |
| G140478 | LOC106605114 | non-coding | downstream | 5972 | 38826282 ~ 38826817 (-) |
| G140470 | LOC106605115 | non-coding | downstream | 10895 | 38815558 ~ 38821894 (-) |
| G140468 | NA | non-coding | downstream | 13734 | 38806968 ~ 38819055 (-) |
| G140486 | NA | non-coding | upstream | 4414 | 38837443 ~ 38837669 (-) |
| G140490 | LOC106605114 | non-coding | upstream | 8653 | 38841682 ~ 38842212 (-) |
| G140491 | NA | non-coding | upstream | 10394 | 38843423 ~ 38843638 (-) |
| G140493 | NA | non-coding | upstream | 11631 | 38844660 ~ 38844881 (-) |
| G140456 | NA | non-coding | upstream | 14196 | 38847225 ~ 38847734 (-) |
| G140479 | NA | other | downstream | 4594 | 38827909 ~ 38828195 (-) |
| G139231 | NA | other | downstream | 1079831 | 37747441 ~ 37752958 (-) |
| LOC110501508 | LOC106605132 | other | downstream | 1369031 | 37442359 ~ 37463839 (-) |
| pnrc2 | LOC106605140 | other | downstream | 1983444 | 36844929 ~ 36849373 (-) |
| G140879 | NA | other | upstream | 230833 | 39063862 ~ 39064418 (-) |
| G141363 | LOC106605077 | other | upstream | 930904 | 39763933 ~ 39765473 (-) |
| LOC110489653 | LOC106605072 | other | upstream | 1391593 | 40224622 ~ 40298333 (-) |
| G142918 | NA | other | upstream | 2030185 | 40863214 ~ 40863721 (-) |
| LOC110489860 | LOC106605053 | other | upstream | 2881517 | 41714269 ~ 41730507 (-) |
