Gene
RNA
| Item | Value |
|---|---|
| gene id | G140862 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39027567 ~ 39027804 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU161899 | True | 238 | lncRNA | 0.47 | 1 | 39027567 | 39027804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489261 | LOC106605105 | coding | downstream | 43595 | 38975605 ~ 38983972 (-) |
| LOC110489249 | LOC106605107 | coding | downstream | 63787 | 38952824 ~ 38963780 (-) |
| LOC110489192 | LOC106605112 | coding | downstream | 135521 | 38858506 ~ 38892046 (-) |
| LOC110489186 | NA | coding | downstream | 173309 | 38852233 ~ 38854258 (-) |
| LOC110489143 | LOC106605116 | coding | downstream | 276338 | 38738678 ~ 38779271 (-) |
| LOC110489287 | LOC106605101 | coding | upstream | 169862 | 39197666 ~ 39209506 (-) |
| LOC118939935 | LOC106605099 | coding | upstream | 190747 | 39218551 ~ 39220640 (-) |
| LOC110489325 | tpi1b | coding | upstream | 201008 | 39228812 ~ 39233769 (-) |
| LOC110489429 | LOC106605091 | coding | upstream | 310385 | 39338189 ~ 39347511 (-) |
| LOC110489468 | LOC106605089 | coding | upstream | 323128 | 39350932 ~ 39365872 (-) |
| G140857 | NA | non-coding | downstream | 8068 | 39019262 ~ 39019499 (-) |
| G140846 | LOC106605103 | non-coding | downstream | 24951 | 39001366 ~ 39002616 (-) |
| G140506 | ppp1r8 | non-coding | downstream | 38494 | 38970629 ~ 38989073 (-) |
| G140560 | mecr | non-coding | downstream | 93339 | 38933850 ~ 38934228 (-) |
| G140511 | NA | non-coding | downstream | 108991 | 38875460 ~ 38918576 (-) |
| G140871 | NA | non-coding | upstream | 13722 | 39041526 ~ 39041636 (-) |
| G140870 | NA | non-coding | upstream | 15471 | 39043275 ~ 39044478 (-) |
| G140876 | NA | non-coding | upstream | 28865 | 39056669 ~ 39056906 (-) |
| G140884 | NA | non-coding | upstream | 43475 | 39071279 ~ 39071687 (-) |
| G140887 | NA | non-coding | upstream | 44808 | 39072612 ~ 39072823 (-) |
| G140479 | NA | other | downstream | 199372 | 38827909 ~ 38828195 (-) |
| LOC110489105 | LOC106605178 | other | downstream | 978901 | 38046700 ~ 38048666 (-) |
| G139231 | NA | other | downstream | 1274609 | 37747441 ~ 37752958 (-) |
| LOC110501508 | LOC106605132 | other | downstream | 1563809 | 37442359 ~ 37463839 (-) |
| pnrc2 | LOC106605140 | other | downstream | 2178222 | 36844929 ~ 36849373 (-) |
| G140879 | NA | other | upstream | 36058 | 39063862 ~ 39064418 (-) |
| G141363 | LOC106605077 | other | upstream | 736129 | 39763933 ~ 39765473 (-) |
| LOC110489653 | LOC106605072 | other | upstream | 1196818 | 40224622 ~ 40298333 (-) |
| G142918 | NA | other | upstream | 1835410 | 40863214 ~ 40863721 (-) |
| LOC110489860 | LOC106605053 | other | upstream | 2686742 | 41714269 ~ 41730507 (-) |
