G140879


Basic Information

Item Value
gene id G140879
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39063862 ~ 39064418 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161916
tgtatatatatgtatatatacatattttattttttttgtttttttcgatgtactttactcaaaccagtgaatatcacttattataaatgagatcattaactatcagctcttggaatatccagggcctatactcttcacattttggttataaaacaactaatccagaattgattaaaaacatcaagggacaggacatcataatcctactggaaacatggtgtcgtggagacatagatactcagtgtccctcaggctatagagaaagtttactaccatcaatcaaacataaaaatgttaaacgaggccgagactcaggtggaatcatcatttggcataagcaggacttagcactgaatgaaatgaaaaaaggtaccactcacatttggctaaaacttaacaaaggtacaatctattgtgacaatgatgtatacatatgtgcagcttatgctcctccttcagattcatcatattatgatgatcagttttttgacaatctccagacagaaatcattacatttcaggcgcagggtaaagtgcttctttgtggagatttcaat

Function

NR:

description
PREDICTED: uncharacterized protein LOC109105496

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161916 True 557 TUCP 0.34 1 39063862 39064418

Neighbor

gene id symbol gene type direction distance location
LOC110489261 LOC106605105 coding downstream 79890 38975605 ~ 38983972 (-)
LOC110489249 LOC106605107 coding downstream 100082 38952824 ~ 38963780 (-)
LOC110489192 LOC106605112 coding downstream 171816 38858506 ~ 38892046 (-)
LOC110489186 NA coding downstream 209604 38852233 ~ 38854258 (-)
LOC110489143 LOC106605116 coding downstream 312633 38738678 ~ 38779271 (-)
LOC110489287 LOC106605101 coding upstream 133248 39197666 ~ 39209506 (-)
LOC118939935 LOC106605099 coding upstream 154133 39218551 ~ 39220640 (-)
LOC110489325 tpi1b coding upstream 164394 39228812 ~ 39233769 (-)
LOC110489429 LOC106605091 coding upstream 273771 39338189 ~ 39347511 (-)
LOC110489468 LOC106605089 coding upstream 286514 39350932 ~ 39365872 (-)
G140876 NA non-coding downstream 6956 39056669 ~ 39056906 (-)
G140870 NA non-coding downstream 19384 39043275 ~ 39044478 (-)
G140871 NA non-coding downstream 22226 39041526 ~ 39041636 (-)
G140862 NA non-coding downstream 36058 39027567 ~ 39027804 (-)
G140857 NA non-coding downstream 44363 39019262 ~ 39019499 (-)
G140884 NA non-coding upstream 6861 39071279 ~ 39071687 (-)
G140887 NA non-coding upstream 8194 39072612 ~ 39072823 (-)
G140914 NA non-coding upstream 30125 39094543 ~ 39094766 (-)
G140918 NA non-coding upstream 36000 39100418 ~ 39100651 (-)
G140925 NA non-coding upstream 44677 39109095 ~ 39109316 (-)
G140479 NA other downstream 235667 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 1015196 38046700 ~ 38048666 (-)
G139231 NA other downstream 1310904 37747441 ~ 37752958 (-)
LOC110501508 LOC106605132 other downstream 1600104 37442359 ~ 37463839 (-)
pnrc2 LOC106605140 other downstream 2214517 36844929 ~ 36849373 (-)
G141363 LOC106605077 other upstream 699515 39763933 ~ 39765473 (-)
LOC110489653 LOC106605072 other upstream 1160204 40224622 ~ 40298333 (-)
G142918 NA other upstream 1798796 40863214 ~ 40863721 (-)
LOC110489860 LOC106605053 other upstream 2650128 41714269 ~ 41730507 (-)
G145010 NA other upstream 3642400 42706818 ~ 42707279 (-)

Expression


Co-expression Network