G140652


Basic Information

Item Value
gene id G140652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39094628 ~ 39094911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161657
tctgaatacttatgtaaatgtgatatttcagttgtatttttttatacattttcagaaatgacaacctgtttttgctttgtcattatggggtattgtgtgtagattgatgaggggaaaacaattgaatacattttagaataaggctgtaacgtaacaatgtggaaaaagtgaaggggtctgaatactttccgaatgcaccgtatgtgTGACTGTCTATCTTCCCCTGGCACTCTATCCCCAGTGTAGTGAAGTGAAGTGGGGTTTAAGTGTAGACAGTCTTTCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161657 True 284 lncRNA 0.37 1 39094628 39094911

Neighbor

gene id symbol gene type direction distance location
LOC110489280 LOC106605103 coding upstream 49971 39000721 ~ 39044657 (+)
LOC110489273 LOC106605104 coding upstream 104158 38987069 ~ 38990470 (+)
LOC110489269 LOC106605108 coding upstream 120671 38861507 ~ 38973957 (+)
LOC118944175 NA coding upstream 129127 38965348 ~ 38965501 (+)
LOC110489231 LOC106605109 coding upstream 142517 38942222 ~ 38952111 (+)
atp1a3 atp1a3 coding downstream 75362 39170273 ~ 39195284 (+)
LOC118944148 NA coding downstream 139449 39234360 ~ 39234415 (+)
LOC110489329 LOC106605098 coding downstream 141616 39236527 ~ 39255790 (+)
LOC110489358 LOC106605095 coding downstream 161515 39256426 ~ 39298064 (+)
LOC110489375 LOC106605093 coding downstream 203498 39298409 ~ 39319882 (+)
G140640 NA non-coding upstream 14932 39079406 ~ 39079696 (+)
G140638 NA non-coding upstream 21623 39072783 ~ 39073005 (+)
G140628 NA non-coding upstream 37131 39057200 ~ 39057497 (+)
G140627 NA non-coding upstream 37642 39056657 ~ 39056986 (+)
G140626 NA non-coding upstream 38184 39056238 ~ 39056444 (+)
G140664 NA non-coding downstream 11983 39106894 ~ 39107101 (+)
G140670 NA non-coding downstream 18153 39113064 ~ 39113353 (+)
G140680 NA non-coding downstream 30154 39125065 ~ 39125371 (+)
G140686 NA non-coding downstream 37570 39132481 ~ 39132796 (+)
G140689 NA non-coding downstream 48920 39143831 ~ 39144100 (+)
G139179 NA other upstream 1042884 38051359 ~ 38051744 (+)
G139101 NA other upstream 1150616 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1153914 37919735 ~ 37940714 (+)
G139004 NA other upstream 1270618 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2692657 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2444384 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2873463 41968374 ~ 41969317 (+)
G144661 NA other downstream 3415419 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4635961 43730872 ~ 43731218 (+)
G146091 NA other downstream 4673796 43768707 ~ 43769162 (+)

Expression


Co-expression Network