G140686


Basic Information

Item Value
gene id G140686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39132481 ~ 39132796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161697
ACAATATACAGTGTCTCTCTGTCACCACATTTAGCATTAACTCTAAGCAGTTAATACTTATTTACTGCTGTCACCTCAGTACAGAAGGACATGTCTTGCCTTTAGCATGGGTTTAACGCAATTCACAACTTAATTGCTGATCATAGTGTTAAACACAAAGAGAATGGTTTTCTGAACGTTTTGTAATATTGACCTTAGGGACCTGCATAATGGACATGCATATTGACACATCACATTGATCCATATTTGATATTTACAAGTTGTGCTTGTTTTGATTTAATTAATTTAATTGTATTCTATTTTTGTAGTTCTATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161697 True 316 lncRNA 0.48 1 39132481 39132796

Neighbor

gene id symbol gene type direction distance location
LOC110489280 LOC106605103 coding upstream 87824 39000721 ~ 39044657 (+)
LOC110489273 LOC106605104 coding upstream 142011 38987069 ~ 38990470 (+)
LOC110489269 LOC106605108 coding upstream 158524 38861507 ~ 38973957 (+)
LOC118944175 NA coding upstream 166980 38965348 ~ 38965501 (+)
LOC110489231 LOC106605109 coding upstream 180370 38942222 ~ 38952111 (+)
atp1a3 atp1a3 coding downstream 37477 39170273 ~ 39195284 (+)
LOC118944148 NA coding downstream 101564 39234360 ~ 39234415 (+)
LOC110489329 LOC106605098 coding downstream 103731 39236527 ~ 39255790 (+)
LOC110489358 LOC106605095 coding downstream 123630 39256426 ~ 39298064 (+)
LOC110489375 LOC106605093 coding downstream 165613 39298409 ~ 39319882 (+)
G140680 NA non-coding upstream 7110 39125065 ~ 39125371 (+)
G140670 NA non-coding upstream 19128 39113064 ~ 39113353 (+)
G140664 NA non-coding upstream 25380 39106894 ~ 39107101 (+)
G140652 NA non-coding upstream 37570 39094628 ~ 39094911 (+)
G140640 NA non-coding upstream 52785 39079406 ~ 39079696 (+)
G140689 NA non-coding downstream 11035 39143831 ~ 39144100 (+)
G140690 NA non-coding downstream 13164 39145960 ~ 39146188 (+)
G140693 NA non-coding downstream 16495 39149291 ~ 39149507 (+)
G140696 NA non-coding downstream 18281 39151077 ~ 39151284 (+)
G140700 NA non-coding downstream 29905 39162701 ~ 39162901 (+)
G139179 NA other upstream 1080737 38051359 ~ 38051744 (+)
G139101 NA other upstream 1188469 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1191767 37919735 ~ 37940714 (+)
G139004 NA other upstream 1308471 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2730510 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2406499 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2835578 41968374 ~ 41969317 (+)
G144661 NA other downstream 3377534 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4598076 43730872 ~ 43731218 (+)
G146091 NA other downstream 4635911 43768707 ~ 43769162 (+)

Expression


Co-expression Network