G140696


Basic Information

Item Value
gene id G140696
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39151077 ~ 39151284 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161707
GTAGAAAATGTGCAGACATCTGAATTAAATTACTTAGGAATTACATGTAGGCTTTTACGCAAGACATAAATAGTACAGAAAATACcagaataaatacattttaaaaaaggcaAACATCTAAGCTTGATTTGTAGGCCATTATCAACGGTTTAATGGTGCTAGGGTTTGTATTAGTCACGTTCTACAAAAACATGAATTTTGTTTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161707 True 208 lncRNA 0.39 1 39151077 39151284

Neighbor

gene id symbol gene type direction distance location
LOC110489280 LOC106605103 coding upstream 106420 39000721 ~ 39044657 (+)
LOC110489273 LOC106605104 coding upstream 160607 38987069 ~ 38990470 (+)
LOC110489269 LOC106605108 coding upstream 177120 38861507 ~ 38973957 (+)
LOC118944175 NA coding upstream 185576 38965348 ~ 38965501 (+)
LOC110489231 LOC106605109 coding upstream 198966 38942222 ~ 38952111 (+)
atp1a3 atp1a3 coding downstream 18989 39170273 ~ 39195284 (+)
LOC118944148 NA coding downstream 83076 39234360 ~ 39234415 (+)
LOC110489329 LOC106605098 coding downstream 85243 39236527 ~ 39255790 (+)
LOC110489358 LOC106605095 coding downstream 105142 39256426 ~ 39298064 (+)
LOC110489375 LOC106605093 coding downstream 147125 39298409 ~ 39319882 (+)
G140693 NA non-coding upstream 1570 39149291 ~ 39149507 (+)
G140690 NA non-coding upstream 4889 39145960 ~ 39146188 (+)
G140689 NA non-coding upstream 6977 39143831 ~ 39144100 (+)
G140686 NA non-coding upstream 18281 39132481 ~ 39132796 (+)
G140680 NA non-coding upstream 25706 39125065 ~ 39125371 (+)
G140700 NA non-coding downstream 11417 39162701 ~ 39162901 (+)
G140701 NA non-coding downstream 11833 39163117 ~ 39163326 (+)
G140703 NA non-coding downstream 13578 39164862 ~ 39165193 (+)
G140705 NA non-coding downstream 14990 39166274 ~ 39166651 (+)
G140707 NA non-coding downstream 17182 39168466 ~ 39168739 (+)
G139179 NA other upstream 1099333 38051359 ~ 38051744 (+)
G139101 NA other upstream 1207065 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1210363 37919735 ~ 37940714 (+)
G139004 NA other upstream 1327067 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2749106 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2388011 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2817090 41968374 ~ 41969317 (+)
G144661 NA other downstream 3359046 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4579588 43730872 ~ 43731218 (+)
G146091 NA other downstream 4617423 43768707 ~ 43769162 (+)

Expression


Co-expression Network