G140707


Basic Information

Item Value
gene id G140707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39168466 ~ 39168739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161718
cgaaacatgtcccagtccacgtgatggaagcagtcttggtgtgtggagtcagcttggtaggaccagcgttggacagacctcagcgtgggagcctcttgttttagtttctgtctgtaggcagggatcaacaaaatggagtcgtggtcagcttttccgaaaggagggcggggcagggccttatatgcgtcgcggaagttagagtaacaatgatccaaggtttttccacccctggttgcgcaatcgatatgctgataaaatttagggagtcttgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161718 True 274 lncRNA 0.35 1 39168466 39168739

Neighbor

gene id symbol gene type direction distance location
LOC110489280 LOC106605103 coding upstream 123809 39000721 ~ 39044657 (+)
LOC110489273 LOC106605104 coding upstream 177996 38987069 ~ 38990470 (+)
LOC110489269 LOC106605108 coding upstream 194509 38861507 ~ 38973957 (+)
LOC118944175 NA coding upstream 202965 38965348 ~ 38965501 (+)
LOC110489231 LOC106605109 coding upstream 216355 38942222 ~ 38952111 (+)
atp1a3 atp1a3 coding downstream 1534 39170273 ~ 39195284 (+)
LOC118944148 NA coding downstream 65621 39234360 ~ 39234415 (+)
LOC110489329 LOC106605098 coding downstream 67788 39236527 ~ 39255790 (+)
LOC110489358 LOC106605095 coding downstream 87687 39256426 ~ 39298064 (+)
LOC110489375 LOC106605093 coding downstream 129670 39298409 ~ 39319882 (+)
G140705 NA non-coding upstream 1815 39166274 ~ 39166651 (+)
G140703 NA non-coding upstream 3273 39164862 ~ 39165193 (+)
G140701 NA non-coding upstream 5140 39163117 ~ 39163326 (+)
G140700 NA non-coding upstream 5565 39162701 ~ 39162901 (+)
G140696 NA non-coding upstream 17182 39151077 ~ 39151284 (+)
G140712 NA non-coding downstream 9040 39177779 ~ 39180761 (+)
G140658 NA non-coding downstream 61880 39230619 ~ 39231565 (+)
G140753 NA non-coding downstream 139930 39308669 ~ 39325188 (+)
G140757 NA non-coding downstream 157469 39326208 ~ 39326426 (+)
G140758 NA non-coding downstream 160586 39329325 ~ 39329577 (+)
G139179 NA other upstream 1116722 38051359 ~ 38051744 (+)
G139101 NA other upstream 1224454 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1227752 37919735 ~ 37940714 (+)
G139004 NA other upstream 1344456 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2766495 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2370556 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2799635 41968374 ~ 41969317 (+)
G144661 NA other downstream 3341591 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4562133 43730872 ~ 43731218 (+)
G146091 NA other downstream 4599968 43768707 ~ 43769162 (+)

Expression


Co-expression Network