G140753


Basic Information

Item Value
gene id G140753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39308669 ~ 39325188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161770
aaatagcccacccaatctacctacctcatccccatactgtttttattttatttacttttctgctcttttgcacatcagtatctctacttgcacatcatcatctgctcatttatcactccagtgttaatctgctaaattgtaattatttgctcctatggcctcctcatgccctttgcacacactgtaaatagactttcttttttctactgtgtcattgacttgttttttgtgttattggctagtttattgtttactccatgtgtaactctgtgttgtctgtcacactgctttgctttatcttggccaggtcgcaattgtaaatgagaact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161770 True 329 lncRNA 0.51 2 39308669 39325188

Neighbor

gene id symbol gene type direction distance location
LOC110489358 LOC106605095 coding upstream 10605 39256426 ~ 39298064 (+)
LOC110489329 LOC106605098 coding upstream 52879 39236527 ~ 39255790 (+)
LOC118944148 NA coding upstream 74254 39234360 ~ 39234415 (+)
atp1a3 atp1a3 coding upstream 113385 39170273 ~ 39195284 (+)
LOC110489280 LOC106605103 coding upstream 264012 39000721 ~ 39044657 (+)
LOC110489418 LOC106605090 coding downstream 3272 39328460 ~ 39337579 (+)
LOC110489446 ubp5 coding downstream 41220 39366408 ~ 39378288 (+)
LOC110489493 LOC100169854 coding downstream 54404 39379592 ~ 39385031 (+)
LOC110501538 LOC100301666 coding downstream 78633 39403821 ~ 39412741 (+)
LOC110489499 LOC106605088 coding downstream 88268 39413456 ~ 39420001 (+)
G140658 NA non-coding upstream 77104 39230619 ~ 39231565 (+)
G140712 NA non-coding upstream 127908 39177779 ~ 39180761 (+)
G140707 NA non-coding upstream 139930 39168466 ~ 39168739 (+)
G140705 NA non-coding upstream 142018 39166274 ~ 39166651 (+)
G140703 NA non-coding upstream 143476 39164862 ~ 39165193 (+)
G140757 NA non-coding downstream 1020 39326208 ~ 39326426 (+)
G140758 NA non-coding downstream 4137 39329325 ~ 39329577 (+)
G140766 NA non-coding downstream 16594 39341782 ~ 39347457 (+)
G140771 NA non-coding downstream 24337 39349525 ~ 39349785 (+)
G140772 NA non-coding downstream 24948 39350136 ~ 39350359 (+)
G139179 NA other upstream 1256925 38051359 ~ 38051744 (+)
G139101 NA other upstream 1364657 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1367955 37919735 ~ 37940714 (+)
G139004 NA other upstream 1484659 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2906698 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2214107 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2643186 41968374 ~ 41969317 (+)
G144661 NA other downstream 3185142 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4405684 43730872 ~ 43731218 (+)
G146091 NA other downstream 4443519 43768707 ~ 43769162 (+)

Expression


Co-expression Network