G140792


Basic Information

Item Value
gene id G140792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39403334 ~ 39403625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161816
gccataccaggcggtgatacagcccgccaggatgctctcgattgtgcatctgtagaagtttgtgagtgcttttggtgacaagccgaatttcttcagcctcctgaggctgcgccttcttcacgacgctgtctgtgtgagtgtaccaattcagtttgtctgtgatgtgtatgccgaggaacttaaaacttgctaccctctccactactgttccatcgatgtggataggggggtgttccctctgctgtttcctgaagtccacaatcatctcctcaaTCATACCGTCATACTGTAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161816 True 292 lncRNA 0.43 1 39403334 39403625

Neighbor

gene id symbol gene type direction distance location
LOC110489493 LOC100169854 coding upstream 18303 39379592 ~ 39385031 (+)
LOC110489446 ubp5 coding upstream 25046 39366408 ~ 39378288 (+)
LOC110489418 LOC106605090 coding upstream 65755 39328460 ~ 39337579 (+)
LOC110489375 LOC106605093 coding upstream 83452 39298409 ~ 39319882 (+)
LOC110489358 LOC106605095 coding upstream 105270 39256426 ~ 39298064 (+)
LOC110501538 LOC100301666 coding downstream 196 39403821 ~ 39412741 (+)
LOC110489499 LOC106605088 coding downstream 9831 39413456 ~ 39420001 (+)
LOC110489505 csn7a coding downstream 26981 39430606 ~ 39440426 (+)
ubxn11 ubxn11 coding downstream 66029 39469654 ~ 39485394 (+)
LOC110489537 LOC106605082 coding downstream 96520 39500145 ~ 39520622 (+)
G140772 NA non-coding upstream 52975 39350136 ~ 39350359 (+)
G140771 NA non-coding upstream 53549 39349525 ~ 39349785 (+)
G140766 NA non-coding upstream 55877 39341782 ~ 39347457 (+)
G140758 NA non-coding upstream 73757 39329325 ~ 39329577 (+)
G140757 NA non-coding upstream 76908 39326208 ~ 39326426 (+)
G140793 NA non-coding downstream 18733 39422358 ~ 39422680 (+)
G140794 NA non-coding downstream 26474 39430099 ~ 39430309 (+)
G140809 NA non-coding downstream 34330 39437955 ~ 39438584 (+)
G140834 NA non-coding downstream 98462 39502087 ~ 39502310 (+)
G139179 NA other upstream 1351590 38051359 ~ 38051744 (+)
G139101 NA other upstream 1459322 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1462620 37919735 ~ 37940714 (+)
G139004 NA other upstream 1579324 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 3001363 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2135670 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2564749 41968374 ~ 41969317 (+)
G144661 NA other downstream 3106705 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4327247 43730872 ~ 43731218 (+)
G146091 NA other downstream 4365082 43768707 ~ 43769162 (+)

Expression


Co-expression Network