G140794


Basic Information

Item Value
gene id G140794
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39430099 ~ 39430309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU161818
GGGatcaacagcaataataatagtagtagtggacatgggattaccattaacaacaactacaacaacaatattcatgagaacaacaatacattaaagcaatggtagtagaccagtgtcaacatgactgagataTATGACATGAcgtggtatgaaagacaaaacaaaacaagatgggaaatattatcgacattactttgcacttttcactggc

Function

NR:

description
eukaryotic translation initiation factor 4 gamma 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161818 True 211 lncRNA 0.38 1 39430099 39430309

Neighbor

gene id symbol gene type direction distance location
LOC110489499 LOC106605088 coding upstream 10098 39413456 ~ 39420001 (+)
LOC110501538 LOC100301666 coding upstream 19580 39403821 ~ 39412741 (+)
LOC110489493 LOC100169854 coding upstream 45068 39379592 ~ 39385031 (+)
LOC110489446 ubp5 coding upstream 51811 39366408 ~ 39378288 (+)
LOC110489418 LOC106605090 coding upstream 92520 39328460 ~ 39337579 (+)
LOC110489505 csn7a coding downstream 297 39430606 ~ 39440426 (+)
ubxn11 ubxn11 coding downstream 39345 39469654 ~ 39485394 (+)
LOC110489537 LOC106605082 coding downstream 69836 39500145 ~ 39520622 (+)
LOC110489572 LOC106605173 coding downstream 91254 39521563 ~ 39524931 (+)
LOC110489581 LOC106605172 coding downstream 97293 39527602 ~ 39530858 (+)
G140793 NA non-coding upstream 7419 39422358 ~ 39422680 (+)
G140792 NA non-coding upstream 26474 39403334 ~ 39403625 (+)
G140772 NA non-coding upstream 79740 39350136 ~ 39350359 (+)
G140771 NA non-coding upstream 80314 39349525 ~ 39349785 (+)
G140809 NA non-coding downstream 7646 39437955 ~ 39438584 (+)
G140834 NA non-coding downstream 71778 39502087 ~ 39502310 (+)
G140804 NA non-coding downstream 86184 39516493 ~ 39550773 (+)
G141146 NA non-coding downstream 130570 39560879 ~ 39561194 (+)
G141148 NA non-coding downstream 132126 39562435 ~ 39562737 (+)
G139179 NA other upstream 1378355 38051359 ~ 38051744 (+)
G139101 NA other upstream 1486087 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1489385 37919735 ~ 37940714 (+)
G139004 NA other upstream 1606089 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 3028128 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2108986 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2538065 41968374 ~ 41969317 (+)
G144661 NA other downstream 3080021 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4300563 43730872 ~ 43731218 (+)
G146091 NA other downstream 4338398 43768707 ~ 43769162 (+)

Expression


Co-expression Network