Gene
RNA
| Item | Value |
|---|---|
| gene id | G141261 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39742888 ~ 39743107 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU162369 | True | 220 | lncRNA | 0.30 | 1 | 39742888 | 39743107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489590 | LOC106605080 | coding | upstream | 195525 | 39540706 ~ 39547363 (+) |
| LOC110489581 | LOC106605172 | coding | upstream | 212030 | 39527602 ~ 39530858 (+) |
| LOC110489572 | LOC106605173 | coding | upstream | 217957 | 39521563 ~ 39524931 (+) |
| LOC110489537 | LOC106605082 | coding | upstream | 222266 | 39500145 ~ 39520622 (+) |
| ubxn11 | ubxn11 | coding | upstream | 257494 | 39469654 ~ 39485394 (+) |
| LOC110489609 | LOC106605074 | coding | downstream | 78773 | 39821880 ~ 39862520 (+) |
| LOC110489640 | LOC106583530 | coding | downstream | 372851 | 40115958 ~ 40292372 (+) |
| galr1a | LOC106605071 | coding | downstream | 566071 | 40309178 ~ 40319263 (+) |
| LOC110489685 | LOC106605069 | coding | downstream | 892992 | 40636099 ~ 40653382 (+) |
| LOC110489695 | LOC106605067 | coding | downstream | 1037919 | 40781026 ~ 40847759 (+) |
| G141260 | NA | non-coding | upstream | 185 | 39742422 ~ 39742703 (+) |
| G141248 | NA | non-coding | upstream | 13891 | 39728760 ~ 39728997 (+) |
| G141245 | NA | non-coding | upstream | 17460 | 39725163 ~ 39725428 (+) |
| G141226 | NA | non-coding | upstream | 43366 | 39696361 ~ 39699522 (+) |
| G141148 | NA | non-coding | upstream | 180151 | 39562435 ~ 39562737 (+) |
| G141262 | NA | non-coding | downstream | 201 | 39743308 ~ 39743592 (+) |
| G141267 | NA | non-coding | downstream | 14466 | 39757573 ~ 39757889 (+) |
| G141270 | NA | non-coding | downstream | 17931 | 39761038 ~ 39761262 (+) |
| znf407 | LOC106605077 | non-coding | downstream | 21708 | 39569485 ~ 39766378 (+) |
| G141367 | NA | non-coding | downstream | 26014 | 39769121 ~ 39769405 (+) |
| G139179 | NA | other | upstream | 1691144 | 38051359 ~ 38051744 (+) |
| G139101 | NA | other | upstream | 1798876 | 37943742 ~ 37944012 (+) |
| G139089 | LOC106605123 | other | upstream | 1802174 | 37919735 ~ 37940714 (+) |
| G139004 | NA | other | upstream | 1918878 | 37777061 ~ 37824010 (+) |
| LOC110488849 | LOC106605147 | other | upstream | 3340917 | 36354883 ~ 36405310 (+) |
| LOC110489834 | eny2 | other | downstream | 1796188 | 41539240 ~ 41541654 (+) |
| G143938 | LOC106605049 | other | downstream | 2225267 | 41968374 ~ 41969317 (+) |
| G144661 | NA | other | downstream | 2767223 | 42510330 ~ 42566030 (+) |
| G146054 | LOC100136012 | other | downstream | 3987765 | 43730872 ~ 43731218 (+) |
| G146091 | NA | other | downstream | 4025600 | 43768707 ~ 43769162 (+) |
