G141377


Basic Information

Item Value
gene id G141377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39775494 ~ 39775716 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162506
aggcaaaattgtgagtgagcccactccttggctgagaagctttactgttggcatgacaccggactgatggtagcgctcaccttgtcttgtCCGggcaagcttttttctggatgccccaaacaatcggaaaggggattcatcagagaaaattctttaccccagtcctgtgcagtccaatccctgtaccttttgcagaatatcagtatgtccctgatgtttttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162506 True 223 lncRNA 0.49 1 39775494 39775716

Neighbor

gene id symbol gene type direction distance location
znf407 LOC106605077 coding upstream 9116 39569485 ~ 39766378 (+)
LOC110489590 LOC106605080 coding upstream 228131 39540706 ~ 39547363 (+)
LOC110489581 LOC106605172 coding upstream 244636 39527602 ~ 39530858 (+)
LOC110489572 LOC106605173 coding upstream 250563 39521563 ~ 39524931 (+)
LOC110489537 LOC106605082 coding upstream 254872 39500145 ~ 39520622 (+)
LOC110489609 LOC106605074 coding downstream 46164 39821880 ~ 39862520 (+)
LOC110489640 LOC106583530 coding downstream 340242 40115958 ~ 40292372 (+)
galr1a LOC106605071 coding downstream 533462 40309178 ~ 40319263 (+)
LOC110489685 LOC106605069 coding downstream 860383 40636099 ~ 40653382 (+)
LOC110489695 LOC106605067 coding downstream 1005310 40781026 ~ 40847759 (+)
G141372 NA non-coding upstream 2979 39772314 ~ 39772515 (+)
G141370 NA non-coding upstream 3942 39771179 ~ 39771552 (+)
G141367 NA non-coding upstream 6089 39769121 ~ 39769405 (+)
G141270 NA non-coding upstream 14232 39761038 ~ 39761262 (+)
G141378 NA non-coding downstream 594 39776310 ~ 39776512 (+)
G141412 NA non-coding downstream 36404 39812120 ~ 39812427 (+)
G141413 NA non-coding downstream 37637 39813353 ~ 39813564 (+)
G141429 NA non-coding downstream 57823 39833539 ~ 39915052 (+)
G141438 NA non-coding downstream 73357 39849073 ~ 39849348 (+)
G139179 NA other upstream 1723750 38051359 ~ 38051744 (+)
G139101 NA other upstream 1831482 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1834780 37919735 ~ 37940714 (+)
G139004 NA other upstream 1951484 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 3373523 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 1763579 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2192658 41968374 ~ 41969317 (+)
G144661 NA other downstream 2734614 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 3955156 43730872 ~ 43731218 (+)
G146091 NA other downstream 3992991 43768707 ~ 43769162 (+)

Expression


Co-expression Network