G141378


Basic Information

Item Value
gene id G141378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39776310 ~ 39776512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162507
actttgcaatgaattgcaattcatccgattactcttcataacattcaggtgtatatgcaaattgccatcatacaaactgaggcagcagaccttgtgaaaatgtatatttgtgtcattctcaaaacttttggacaCGACTGTATATGTCTAGTTTTTAAAATGTCTCTTGCTTTTCTTTCTAAATGTTTCCAGTACAATAGAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162507 True 203 lncRNA 0.36 1 39776310 39776512

Neighbor

gene id symbol gene type direction distance location
znf407 LOC106605077 coding upstream 9932 39569485 ~ 39766378 (+)
LOC110489590 LOC106605080 coding upstream 228947 39540706 ~ 39547363 (+)
LOC110489581 LOC106605172 coding upstream 245452 39527602 ~ 39530858 (+)
LOC110489572 LOC106605173 coding upstream 251379 39521563 ~ 39524931 (+)
LOC110489537 LOC106605082 coding upstream 255688 39500145 ~ 39520622 (+)
LOC110489609 LOC106605074 coding downstream 45368 39821880 ~ 39862520 (+)
LOC110489640 LOC106583530 coding downstream 339446 40115958 ~ 40292372 (+)
galr1a LOC106605071 coding downstream 532666 40309178 ~ 40319263 (+)
LOC110489685 LOC106605069 coding downstream 859587 40636099 ~ 40653382 (+)
LOC110489695 LOC106605067 coding downstream 1004514 40781026 ~ 40847759 (+)
G141377 NA non-coding upstream 594 39775494 ~ 39775716 (+)
G141372 NA non-coding upstream 3795 39772314 ~ 39772515 (+)
G141370 NA non-coding upstream 4758 39771179 ~ 39771552 (+)
G141367 NA non-coding upstream 6905 39769121 ~ 39769405 (+)
G141412 NA non-coding downstream 35608 39812120 ~ 39812427 (+)
G141413 NA non-coding downstream 36841 39813353 ~ 39813564 (+)
G141429 NA non-coding downstream 57027 39833539 ~ 39915052 (+)
G141438 NA non-coding downstream 72561 39849073 ~ 39849348 (+)
G141486 NA non-coding downstream 165637 39942149 ~ 39942372 (+)
G139179 NA other upstream 1724566 38051359 ~ 38051744 (+)
G139101 NA other upstream 1832298 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1835596 37919735 ~ 37940714 (+)
G139004 NA other upstream 1952300 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 3374339 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 1762783 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2191862 41968374 ~ 41969317 (+)
G144661 NA other downstream 2733818 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 3954360 43730872 ~ 43731218 (+)
G146091 NA other downstream 3992195 43768707 ~ 43769162 (+)

Expression


Co-expression Network