G141413


Basic Information

Item Value
gene id G141413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39813353 ~ 39813564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162542
gtgtaatgctcattccttcgacgataaacgcgaacccgaccatcacccctggtgagacaaccgcgacttgtcagtgaagagcactttttgccagtcctgtctggtccagcgacggtgggtttgtgcccataggcgacgtgatgtctggtgaggatctgccttacaacaggcctacaagccctcagtccagcctctctcagcttattgcagac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613431, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162542 True 212 lncRNA 0.41 1 39813353 39813564

Neighbor

gene id symbol gene type direction distance location
znf407 LOC106605077 coding upstream 46975 39569485 ~ 39766378 (+)
LOC110489590 LOC106605080 coding upstream 265990 39540706 ~ 39547363 (+)
LOC110489581 LOC106605172 coding upstream 282495 39527602 ~ 39530858 (+)
LOC110489572 LOC106605173 coding upstream 288422 39521563 ~ 39524931 (+)
LOC110489537 LOC106605082 coding upstream 292731 39500145 ~ 39520622 (+)
LOC110489609 LOC106605074 coding downstream 8316 39821880 ~ 39862520 (+)
LOC110489640 LOC106583530 coding downstream 302394 40115958 ~ 40292372 (+)
galr1a LOC106605071 coding downstream 495614 40309178 ~ 40319263 (+)
LOC110489685 LOC106605069 coding downstream 822535 40636099 ~ 40653382 (+)
LOC110489695 LOC106605067 coding downstream 967462 40781026 ~ 40847759 (+)
G141412 NA non-coding upstream 926 39812120 ~ 39812427 (+)
G141378 NA non-coding upstream 36841 39776310 ~ 39776512 (+)
G141377 NA non-coding upstream 37637 39775494 ~ 39775716 (+)
G141372 NA non-coding upstream 40838 39772314 ~ 39772515 (+)
G141370 NA non-coding upstream 41801 39771179 ~ 39771552 (+)
G141429 NA non-coding downstream 19975 39833539 ~ 39915052 (+)
G141438 NA non-coding downstream 35509 39849073 ~ 39849348 (+)
G141486 NA non-coding downstream 128585 39942149 ~ 39942372 (+)
G141503 NA non-coding downstream 154504 39968068 ~ 39968370 (+)
G141507 NA non-coding downstream 163075 39976639 ~ 39984542 (+)
G139179 NA other upstream 1761609 38051359 ~ 38051744 (+)
G139101 NA other upstream 1869341 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1872639 37919735 ~ 37940714 (+)
G139004 NA other upstream 1989343 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 3411382 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 1725731 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2154810 41968374 ~ 41969317 (+)
G144661 NA other downstream 2696766 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 3917308 43730872 ~ 43731218 (+)
G146091 NA other downstream 3955143 43768707 ~ 43769162 (+)

Expression


Co-expression Network