Gene
RNA
| Item | Value |
|---|---|
| gene id | G141486 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39942149 ~ 39942372 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU162619 | True | 224 | lncRNA | 0.46 | 1 | 39942149 | 39942372 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489609 | LOC106605074 | coding | upstream | 79629 | 39821880 ~ 39862520 (+) |
| znf407 | LOC106605077 | coding | upstream | 175771 | 39569485 ~ 39766378 (+) |
| LOC110489590 | LOC106605080 | coding | upstream | 394786 | 39540706 ~ 39547363 (+) |
| LOC110489581 | LOC106605172 | coding | upstream | 411291 | 39527602 ~ 39530858 (+) |
| LOC110489572 | LOC106605173 | coding | upstream | 417218 | 39521563 ~ 39524931 (+) |
| LOC110489640 | LOC106583530 | coding | downstream | 173586 | 40115958 ~ 40292372 (+) |
| galr1a | LOC106605071 | coding | downstream | 366806 | 40309178 ~ 40319263 (+) |
| LOC110489685 | LOC106605069 | coding | downstream | 693727 | 40636099 ~ 40653382 (+) |
| LOC110489695 | LOC106605067 | coding | downstream | 838654 | 40781026 ~ 40847759 (+) |
| LOC110489783 | LOC106605064 | coding | downstream | 938802 | 40881174 ~ 40885140 (+) |
| G141429 | NA | non-coding | upstream | 27097 | 39833539 ~ 39915052 (+) |
| G141438 | NA | non-coding | upstream | 92801 | 39849073 ~ 39849348 (+) |
| G141413 | NA | non-coding | upstream | 128585 | 39813353 ~ 39813564 (+) |
| G141412 | NA | non-coding | upstream | 129722 | 39812120 ~ 39812427 (+) |
| G141378 | NA | non-coding | upstream | 165637 | 39776310 ~ 39776512 (+) |
| G141503 | NA | non-coding | downstream | 25696 | 39968068 ~ 39968370 (+) |
| G141507 | NA | non-coding | downstream | 34267 | 39976639 ~ 39984542 (+) |
| G141522 | NA | non-coding | downstream | 61858 | 40004230 ~ 40007277 (+) |
| G141613 | NA | non-coding | downstream | 294135 | 40236507 ~ 40294116 (+) |
| G139179 | NA | other | upstream | 1890405 | 38051359 ~ 38051744 (+) |
| G139101 | NA | other | upstream | 1998137 | 37943742 ~ 37944012 (+) |
| G139089 | LOC106605123 | other | upstream | 2001435 | 37919735 ~ 37940714 (+) |
| G139004 | NA | other | upstream | 2118139 | 37777061 ~ 37824010 (+) |
| LOC110488849 | LOC106605147 | other | upstream | 3540178 | 36354883 ~ 36405310 (+) |
| LOC110489834 | eny2 | other | downstream | 1596923 | 41539240 ~ 41541654 (+) |
| G143938 | LOC106605049 | other | downstream | 2026002 | 41968374 ~ 41969317 (+) |
| G144661 | NA | other | downstream | 2567958 | 42510330 ~ 42566030 (+) |
| G146054 | LOC100136012 | other | downstream | 3788500 | 43730872 ~ 43731218 (+) |
| G146091 | NA | other | downstream | 3826335 | 43768707 ~ 43769162 (+) |
