G141503


Basic Information

Item Value
gene id G141503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39968068 ~ 39968370 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162636
acacaatataccccataatgacaaagcaaaaacaggttaagaaatgtttgcaaatgttttaaaaaaccccagaaatattacatttacataagtattcagacctactCATGTCCAAtacattgaatttaccacaggtggactccaatcacgttgtagaaacatctcaaggatgatcaacggaaacaggatgcacctgagctcaatttcgagtctcatagcaaatggtctgaatacttatgtaaaataaggtatttctgttttattgttcaattagcaaacattttgaaaaaacagttgtcactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU162636 True 303 lncRNA 0.37 1 39968068 39968370

Neighbor

gene id symbol gene type direction distance location
LOC110489609 LOC106605074 coding upstream 105548 39821880 ~ 39862520 (+)
znf407 LOC106605077 coding upstream 201690 39569485 ~ 39766378 (+)
LOC110489590 LOC106605080 coding upstream 420705 39540706 ~ 39547363 (+)
LOC110489581 LOC106605172 coding upstream 437210 39527602 ~ 39530858 (+)
LOC110489572 LOC106605173 coding upstream 443137 39521563 ~ 39524931 (+)
LOC110489640 LOC106583530 coding downstream 147588 40115958 ~ 40292372 (+)
galr1a LOC106605071 coding downstream 340808 40309178 ~ 40319263 (+)
LOC110489685 LOC106605069 coding downstream 667729 40636099 ~ 40653382 (+)
LOC110489695 LOC106605067 coding downstream 812656 40781026 ~ 40847759 (+)
LOC110489783 LOC106605064 coding downstream 912804 40881174 ~ 40885140 (+)
G141486 NA non-coding upstream 25696 39942149 ~ 39942372 (+)
G141429 NA non-coding upstream 53016 39833539 ~ 39915052 (+)
G141438 NA non-coding upstream 118720 39849073 ~ 39849348 (+)
G141413 NA non-coding upstream 154504 39813353 ~ 39813564 (+)
G141412 NA non-coding upstream 155641 39812120 ~ 39812427 (+)
G141507 NA non-coding downstream 8269 39976639 ~ 39984542 (+)
G141522 NA non-coding downstream 35860 40004230 ~ 40007277 (+)
G141613 NA non-coding downstream 268137 40236507 ~ 40294116 (+)
G141799 NA non-coding downstream 437124 40405494 ~ 40406246 (+)
G139179 NA other upstream 1916324 38051359 ~ 38051744 (+)
G139101 NA other upstream 2024056 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 2027354 37919735 ~ 37940714 (+)
G139004 NA other upstream 2144058 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 3566097 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 1570925 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2000004 41968374 ~ 41969317 (+)
G144661 NA other downstream 2541960 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 3762502 43730872 ~ 43731218 (+)
G146091 NA other downstream 3800337 43768707 ~ 43769162 (+)

Expression


Co-expression Network