G141799


Basic Information

Item Value
gene id G141799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40405494 ~ 40406246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162960
ccctgtccgggggtgtcctcggatggggtcacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttctctaattctctccttctccctttctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctatccccagtccacctgactgtgctgctgctccagtttcaactgctctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttgaccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacaaagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162960 True 501 lncRNA 0.44 2 40405494 40406246

Neighbor

gene id symbol gene type direction distance location
galr1a LOC106605071 coding upstream 86231 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 180162 40115958 ~ 40292372 (+)
LOC110489609 LOC106605074 coding upstream 542974 39821880 ~ 39862520 (+)
znf407 LOC106605077 coding upstream 639116 39569485 ~ 39766378 (+)
LOC110489590 LOC106605080 coding upstream 858131 39540706 ~ 39547363 (+)
LOC110489685 LOC106605069 coding downstream 229853 40636099 ~ 40653382 (+)
LOC110489695 LOC106605067 coding downstream 374780 40781026 ~ 40847759 (+)
LOC110489783 LOC106605064 coding downstream 474928 40881174 ~ 40885140 (+)
LOC110489815 LOC106605058 coding downstream 888435 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 1048013 41454259 ~ 41460908 (+)
G141613 NA non-coding upstream 111378 40236507 ~ 40294116 (+)
G141522 NA non-coding upstream 398217 40004230 ~ 40007277 (+)
G141507 NA non-coding upstream 420952 39976639 ~ 39984542 (+)
G141503 NA non-coding upstream 437124 39968068 ~ 39968370 (+)
G142202 NA non-coding downstream 26102 40432348 ~ 40432598 (+)
G142204 NA non-coding downstream 27283 40433529 ~ 40433864 (+)
G142312 NA non-coding downstream 99476 40505722 ~ 40505961 (+)
G142314 NA non-coding downstream 99773 40506019 ~ 40506222 (+)
G142372 NA non-coding downstream 178429 40584675 ~ 40585526 (+)
G139179 NA other upstream 2353750 38051359 ~ 38051744 (+)
G139101 NA other upstream 2461482 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 2464780 37919735 ~ 37940714 (+)
G139004 NA other upstream 2581484 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4003523 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 1133049 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 1562128 41968374 ~ 41969317 (+)
G144661 NA other downstream 2104084 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 3324626 43730872 ~ 43731218 (+)
G146091 NA other downstream 3362461 43768707 ~ 43769162 (+)

Expression


Co-expression Network