Gene
RNA
| Item | Value |
|---|---|
| gene id | G142372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 40584675 ~ 40585526 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU163552 | True | 313 | lncRNA | 0.47 | 2 | 40584675 | 40585526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| galr1a | LOC106605071 | coding | upstream | 265412 | 40309178 ~ 40319263 (+) |
| LOC110489640 | LOC106583530 | coding | upstream | 359343 | 40115958 ~ 40292372 (+) |
| LOC110489609 | LOC106605074 | coding | upstream | 722155 | 39821880 ~ 39862520 (+) |
| znf407 | LOC106605077 | coding | upstream | 818297 | 39569485 ~ 39766378 (+) |
| LOC110489590 | LOC106605080 | coding | upstream | 1037312 | 39540706 ~ 39547363 (+) |
| LOC110489685 | LOC106605069 | coding | downstream | 50573 | 40636099 ~ 40653382 (+) |
| LOC110489695 | LOC106605067 | coding | downstream | 195500 | 40781026 ~ 40847759 (+) |
| LOC110489783 | LOC106605064 | coding | downstream | 295648 | 40881174 ~ 40885140 (+) |
| LOC110489815 | LOC106605058 | coding | downstream | 709155 | 41294681 ~ 41355200 (+) |
| LOC110489825 | LOC106605056 | coding | downstream | 868733 | 41454259 ~ 41460908 (+) |
| G142314 | NA | non-coding | upstream | 78453 | 40506019 ~ 40506222 (+) |
| G142312 | NA | non-coding | upstream | 78714 | 40505722 ~ 40505961 (+) |
| G142204 | NA | non-coding | upstream | 150811 | 40433529 ~ 40433864 (+) |
| G142202 | NA | non-coding | upstream | 152077 | 40432348 ~ 40432598 (+) |
| G141799 | NA | non-coding | upstream | 178429 | 40405494 ~ 40406246 (+) |
| G142612 | NA | non-coding | downstream | 167966 | 40753492 ~ 40753751 (+) |
| G142643 | NA | non-coding | downstream | 191672 | 40777198 ~ 40777407 (+) |
| G142660 | NA | non-coding | downstream | 217849 | 40803375 ~ 40803591 (+) |
| G142733 | NA | non-coding | downstream | 338786 | 40924312 ~ 40924529 (+) |
| G139179 | NA | other | upstream | 2532931 | 38051359 ~ 38051744 (+) |
| G139101 | NA | other | upstream | 2640663 | 37943742 ~ 37944012 (+) |
| G139089 | LOC106605123 | other | upstream | 2643961 | 37919735 ~ 37940714 (+) |
| G139004 | NA | other | upstream | 2760665 | 37777061 ~ 37824010 (+) |
| LOC110488849 | LOC106605147 | other | upstream | 4182704 | 36354883 ~ 36405310 (+) |
| LOC110489834 | eny2 | other | downstream | 953769 | 41539240 ~ 41541654 (+) |
| G143938 | LOC106605049 | other | downstream | 1382848 | 41968374 ~ 41969317 (+) |
| G144661 | NA | other | downstream | 1924804 | 42510330 ~ 42566030 (+) |
| G146054 | LOC100136012 | other | downstream | 3145346 | 43730872 ~ 43731218 (+) |
| G146091 | NA | other | downstream | 3183181 | 43768707 ~ 43769162 (+) |
