G142523


Basic Information

Item Value
gene id G142523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40628909 ~ 40709425 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU163705
ggttttcttccagaatggtcctgtatttggctccatccatcttcccatacattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttaatctgaccagagcaccttcttccacatgtttggtgtgtctggcaaactttaaacgacactttgtatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactaattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccttttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgacactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacatctggagagagtttgct

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163705 True 814 lncRNA 0.48 2 40628909 40709425

Neighbor

gene id symbol gene type direction distance location
LOC110489653 LOC106605072 coding downstream 330576 40224622 ~ 40298333 (-)
LOC110489634 LOC106605073 coding downstream 549910 40003770 ~ 40078999 (-)
LOC110489623 zadh2 coding downstream 807064 39814123 ~ 39821845 (-)
nr0b2a LOC106605079 coding downstream 1073476 39553803 ~ 39555433 (-)
LOC118940039 NA coding downstream 1127421 39499737 ~ 39501488 (-)
LOC110489712 LOC106605066 coding upstream 144790 40854215 ~ 40861194 (-)
LOC110489774 LOC106583729 coding upstream 158464 40867889 ~ 40907134 (-)
LOC110489723 NA coding upstream 218791 40928216 ~ 41111980 (-)
LOC110489798 LOC106583742 coding upstream 447583 41157008 ~ 41237519 (-)
LOC110489806 if36 coding upstream 530467 41239892 ~ 41285762 (-)
G142334 NA non-coding downstream 104654 40524046 ~ 40524255 (-)
G142070 NA non-coding downstream 412290 40216404 ~ 40216619 (-)
G142069 NA non-coding downstream 412587 40216066 ~ 40216322 (-)
G141925 NA non-coding downstream 615295 40008380 ~ 40013614 (-)
G142589 NA non-coding upstream 13719 40723144 ~ 40723382 (-)
G142607 NA non-coding upstream 27847 40737272 ~ 40737546 (-)
G142635 NA non-coding upstream 60185 40769610 ~ 40769890 (-)
G142642 NA non-coding upstream 65352 40774777 ~ 40775015 (-)
G142865 NA non-coding upstream 68092 40777517 ~ 40780638 (-)
G141363 LOC106605077 other downstream 863436 39763933 ~ 39765473 (-)
G140879 NA other downstream 1564491 39063862 ~ 39064418 (-)
G140479 NA other downstream 1800714 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 2580243 38046700 ~ 38048666 (-)
G142918 NA other upstream 153789 40863214 ~ 40863721 (-)
LOC110489860 LOC106605053 other upstream 1005121 41714269 ~ 41730507 (-)
G145010 NA other upstream 1997393 42706818 ~ 42707279 (-)
G145767 NA other upstream 2561292 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 2663415 43372725 ~ 43392160 (-)

Expression


Co-expression Network