Gene
RNA
| Item | Value |
|---|---|
| gene id | G142881 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 40798363 ~ 40798569 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: nuclear factor of activated T-cells, cytoplasmic 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU164093 | True | 207 | lncRNA | 0.42 | 1 | 40798363 | 40798569 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489653 | LOC106605072 | coding | downstream | 500030 | 40224622 ~ 40298333 (-) |
| LOC110489634 | LOC106605073 | coding | downstream | 719364 | 40003770 ~ 40078999 (-) |
| LOC110489623 | zadh2 | coding | downstream | 976518 | 39814123 ~ 39821845 (-) |
| nr0b2a | LOC106605079 | coding | downstream | 1242930 | 39553803 ~ 39555433 (-) |
| LOC118940039 | NA | coding | downstream | 1296875 | 39499737 ~ 39501488 (-) |
| LOC110489712 | LOC106605066 | coding | upstream | 55646 | 40854215 ~ 40861194 (-) |
| LOC110489774 | LOC106583729 | coding | upstream | 69320 | 40867889 ~ 40907134 (-) |
| LOC110489723 | NA | coding | upstream | 129647 | 40928216 ~ 41111980 (-) |
| LOC110489798 | LOC106583742 | coding | upstream | 358439 | 41157008 ~ 41237519 (-) |
| LOC110489806 | if36 | coding | upstream | 441323 | 41239892 ~ 41285762 (-) |
| G142880 | NA | non-coding | downstream | 181 | 40797970 ~ 40798182 (-) |
| G142877 | NA | non-coding | downstream | 1718 | 40796417 ~ 40796645 (-) |
| G142869 | LOC106605067 | non-coding | downstream | 12035 | 40785254 ~ 40786328 (-) |
| G142867 | NA | non-coding | downstream | 16767 | 40781017 ~ 40781596 (-) |
| G142865 | NA | non-coding | downstream | 17725 | 40777517 ~ 40780638 (-) |
| G142886 | NA | non-coding | upstream | 5639 | 40804208 ~ 40804523 (-) |
| G142888 | NA | non-coding | upstream | 7014 | 40805583 ~ 40805818 (-) |
| G142893 | NA | non-coding | upstream | 14003 | 40812572 ~ 40812871 (-) |
| G142900 | LOC106605067 | non-coding | upstream | 27875 | 40826444 ~ 40827101 (-) |
| G142902 | NA | non-coding | upstream | 31946 | 40830515 ~ 40830739 (-) |
| G141363 | LOC106605077 | other | downstream | 1032890 | 39763933 ~ 39765473 (-) |
| G140879 | NA | other | downstream | 1733945 | 39063862 ~ 39064418 (-) |
| G140479 | NA | other | downstream | 1970168 | 38827909 ~ 38828195 (-) |
| LOC110489105 | LOC106605178 | other | downstream | 2749697 | 38046700 ~ 38048666 (-) |
| G142918 | NA | other | upstream | 64645 | 40863214 ~ 40863721 (-) |
| LOC110489860 | LOC106605053 | other | upstream | 915977 | 41714269 ~ 41730507 (-) |
| G145010 | NA | other | upstream | 1908249 | 42706818 ~ 42707279 (-) |
| G145767 | NA | other | upstream | 2472148 | 43270717 ~ 43272516 (-) |
| LOC110490183 | LOC106605015 | other | upstream | 2574271 | 43372725 ~ 43392160 (-) |
