Gene
RNA
| Item | Value |
|---|---|
| gene id | G142900 |
| gene name | LOC106605067 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 40826444 ~ 40827101 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU164112 | True | 658 | lncRNA | 0.36 | 1 | 40826444 | 40827101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489653 | LOC106605072 | coding | downstream | 528111 | 40224622 ~ 40298333 (-) |
| LOC110489634 | LOC106605073 | coding | downstream | 747445 | 40003770 ~ 40078999 (-) |
| LOC110489623 | zadh2 | coding | downstream | 1004599 | 39814123 ~ 39821845 (-) |
| nr0b2a | LOC106605079 | coding | downstream | 1271011 | 39553803 ~ 39555433 (-) |
| LOC118940039 | NA | coding | downstream | 1324956 | 39499737 ~ 39501488 (-) |
| LOC110489712 | LOC106605066 | coding | upstream | 27114 | 40854215 ~ 40861194 (-) |
| LOC110489774 | LOC106583729 | coding | upstream | 40788 | 40867889 ~ 40907134 (-) |
| LOC110489723 | NA | coding | upstream | 101115 | 40928216 ~ 41111980 (-) |
| LOC110489798 | LOC106583742 | coding | upstream | 329907 | 41157008 ~ 41237519 (-) |
| LOC110489806 | if36 | coding | upstream | 412791 | 41239892 ~ 41285762 (-) |
| G142893 | NA | non-coding | downstream | 13573 | 40812572 ~ 40812871 (-) |
| G142888 | NA | non-coding | downstream | 20626 | 40805583 ~ 40805818 (-) |
| G142886 | NA | non-coding | downstream | 21921 | 40804208 ~ 40804523 (-) |
| G142881 | NA | non-coding | downstream | 27875 | 40798363 ~ 40798569 (-) |
| G142880 | NA | non-coding | downstream | 28262 | 40797970 ~ 40798182 (-) |
| G142902 | NA | non-coding | upstream | 3414 | 40830515 ~ 40830739 (-) |
| G142903 | NA | non-coding | upstream | 4727 | 40831828 ~ 40832059 (-) |
| G142907 | NA | non-coding | upstream | 11298 | 40838399 ~ 40838698 (-) |
| G142909 | NA | non-coding | upstream | 14499 | 40841600 ~ 40841822 (-) |
| G142912 | NA | non-coding | upstream | 18439 | 40845540 ~ 40845744 (-) |
| G141363 | LOC106605077 | other | downstream | 1060971 | 39763933 ~ 39765473 (-) |
| G140879 | NA | other | downstream | 1762026 | 39063862 ~ 39064418 (-) |
| G140479 | NA | other | downstream | 1998249 | 38827909 ~ 38828195 (-) |
| LOC110489105 | LOC106605178 | other | downstream | 2777778 | 38046700 ~ 38048666 (-) |
| G142918 | NA | other | upstream | 36113 | 40863214 ~ 40863721 (-) |
| LOC110489860 | LOC106605053 | other | upstream | 887445 | 41714269 ~ 41730507 (-) |
| G145010 | NA | other | upstream | 1879717 | 42706818 ~ 42707279 (-) |
| G145767 | NA | other | upstream | 2443616 | 43270717 ~ 43272516 (-) |
| LOC110490183 | LOC106605015 | other | upstream | 2545739 | 43372725 ~ 43392160 (-) |
