Gene
RNA
| Item | Value |
|---|---|
| gene id | G142912 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 40845540 ~ 40845744 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: nuclear factor of activated T-cells, cytoplasmic 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU164125 | True | 205 | lncRNA | 0.51 | 1 | 40845540 | 40845744 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489653 | LOC106605072 | coding | downstream | 547207 | 40224622 ~ 40298333 (-) |
| LOC110489634 | LOC106605073 | coding | downstream | 766541 | 40003770 ~ 40078999 (-) |
| LOC110489623 | zadh2 | coding | downstream | 1023695 | 39814123 ~ 39821845 (-) |
| nr0b2a | LOC106605079 | coding | downstream | 1290107 | 39553803 ~ 39555433 (-) |
| LOC118940039 | NA | coding | downstream | 1344052 | 39499737 ~ 39501488 (-) |
| LOC110489712 | LOC106605066 | coding | upstream | 8471 | 40854215 ~ 40861194 (-) |
| LOC110489774 | LOC106583729 | coding | upstream | 22145 | 40867889 ~ 40907134 (-) |
| LOC110489723 | NA | coding | upstream | 82472 | 40928216 ~ 41111980 (-) |
| LOC110489798 | LOC106583742 | coding | upstream | 311264 | 41157008 ~ 41237519 (-) |
| LOC110489806 | if36 | coding | upstream | 394148 | 41239892 ~ 41285762 (-) |
| G142909 | NA | non-coding | downstream | 3718 | 40841600 ~ 40841822 (-) |
| G142907 | NA | non-coding | downstream | 6842 | 40838399 ~ 40838698 (-) |
| G142903 | NA | non-coding | downstream | 13481 | 40831828 ~ 40832059 (-) |
| G142902 | NA | non-coding | downstream | 14801 | 40830515 ~ 40830739 (-) |
| G142900 | LOC106605067 | non-coding | downstream | 18439 | 40826444 ~ 40827101 (-) |
| G142913 | NA | non-coding | upstream | 218 | 40845962 ~ 40847760 (-) |
| G142942 | NA | non-coding | upstream | 75782 | 40921526 ~ 40921746 (-) |
| G142944 | NA | non-coding | upstream | 107303 | 40953047 ~ 40953318 (-) |
| G142948 | NA | non-coding | upstream | 117522 | 40963266 ~ 41022443 (-) |
| G142992 | LOC107712493 | non-coding | upstream | 189833 | 41035577 ~ 41036199 (-) |
| G141363 | LOC106605077 | other | downstream | 1080067 | 39763933 ~ 39765473 (-) |
| G140879 | NA | other | downstream | 1781122 | 39063862 ~ 39064418 (-) |
| G140479 | NA | other | downstream | 2017345 | 38827909 ~ 38828195 (-) |
| LOC110489105 | LOC106605178 | other | downstream | 2796874 | 38046700 ~ 38048666 (-) |
| G142918 | NA | other | upstream | 17470 | 40863214 ~ 40863721 (-) |
| LOC110489860 | LOC106605053 | other | upstream | 868802 | 41714269 ~ 41730507 (-) |
| G145010 | NA | other | upstream | 1861074 | 42706818 ~ 42707279 (-) |
| G145767 | NA | other | upstream | 2424973 | 43270717 ~ 43272516 (-) |
| LOC110490183 | LOC106605015 | other | upstream | 2527096 | 43372725 ~ 43392160 (-) |
