G142918


Basic Information

Item Value
gene id G142918
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40863214 ~ 40863721 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU164135
gagaaaactgatcagagatgcagccaagaggcccatgatcactctgaatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatacataacaagtgtcgtttaaagtttgccacaagccacctgggagacacaacaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggaaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacaaaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggaga

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164135 True 508 TUCP 0.45 1 40863214 40863721

Neighbor

gene id symbol gene type direction distance location
LOC110489712 LOC106605066 coding downstream 2020 40854215 ~ 40861194 (-)
LOC110489653 LOC106605072 coding downstream 564881 40224622 ~ 40298333 (-)
LOC110489634 LOC106605073 coding downstream 784215 40003770 ~ 40078999 (-)
LOC110489623 zadh2 coding downstream 1041369 39814123 ~ 39821845 (-)
nr0b2a LOC106605079 coding downstream 1307781 39553803 ~ 39555433 (-)
LOC110489774 LOC106583729 coding upstream 4168 40867889 ~ 40907134 (-)
LOC110489723 NA coding upstream 64495 40928216 ~ 41111980 (-)
LOC110489798 LOC106583742 coding upstream 293287 41157008 ~ 41237519 (-)
LOC110489806 if36 coding upstream 376171 41239892 ~ 41285762 (-)
LOC110489824 LOC106605057 coding upstream 572906 41436627 ~ 41439816 (-)
G142913 NA non-coding downstream 15454 40845962 ~ 40847760 (-)
G142912 NA non-coding downstream 17470 40845540 ~ 40845744 (-)
G142909 NA non-coding downstream 21392 40841600 ~ 40841822 (-)
G142907 NA non-coding downstream 24516 40838399 ~ 40838698 (-)
G142903 NA non-coding downstream 31155 40831828 ~ 40832059 (-)
G142942 NA non-coding upstream 57805 40921526 ~ 40921746 (-)
G142944 NA non-coding upstream 89326 40953047 ~ 40953318 (-)
G142948 NA non-coding upstream 99545 40963266 ~ 41022443 (-)
G142992 LOC107712493 non-coding upstream 171856 41035577 ~ 41036199 (-)
G143030 NA non-coding upstream 227063 41090784 ~ 41091054 (-)
G141363 LOC106605077 other downstream 1097741 39763933 ~ 39765473 (-)
G140879 NA other downstream 1798796 39063862 ~ 39064418 (-)
G140479 NA other downstream 2035019 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 2814548 38046700 ~ 38048666 (-)
LOC110489860 LOC106605053 other upstream 850825 41714269 ~ 41730507 (-)
G145010 NA other upstream 1843097 42706818 ~ 42707279 (-)
G145767 NA other upstream 2406996 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 2509119 43372725 ~ 43392160 (-)
LOC110490298 LOC106605170 other upstream 2912342 43776063 ~ 43783884 (-)

Expression


Co-expression Network