G142735


Basic Information

Item Value
gene id G142735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40926328 ~ 40926634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU163939
gAACAATGGTTTTAAGTATAAGTATATGCATACCACAATAAAATGACTAAACTAAAGTATAAGGCCTACCACAAAATACAATGGCTTAAACTGAAGCCATTTGCATTCATTGAAAAAACATAGTGTATCAGATGCTGCTACCAATAAATTGATTCATAGCCTTTGGagtgtaaatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgacacatttcaggcttcaaacataaagatataaaactatatttttttgtgaagaatcaacaacaagtgggacacaatcatgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163939 True 307 lncRNA 0.48 1 40926328 40926634

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 41188 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 78569 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 272946 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 607065 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 700996 40115958 ~ 40292372 (+)
LOC110489815 LOC106605058 coding downstream 368047 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 527625 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 612606 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 767803 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 804051 41730685 ~ 41741910 (+)
G142733 NA non-coding upstream 1799 40924312 ~ 40924529 (+)
G142660 NA non-coding upstream 122737 40803375 ~ 40803591 (+)
G142643 NA non-coding upstream 148921 40777198 ~ 40777407 (+)
G142612 NA non-coding upstream 172577 40753492 ~ 40753751 (+)
G142707 NA non-coding downstream 1585 40928219 ~ 40928482 (+)
G142706 NA non-coding downstream 10718 40937352 ~ 40940688 (+)
G142737 NA non-coding downstream 14544 40941178 ~ 40941802 (+)
G142738 NA non-coding downstream 15607 40942241 ~ 40942677 (+)
G142739 NA non-coding downstream 16437 40943071 ~ 40943488 (+)
G139179 NA other upstream 2874584 38051359 ~ 38051744 (+)
G139101 NA other upstream 2982316 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 2985614 37919735 ~ 37940714 (+)
G139004 NA other upstream 3102318 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4524357 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 1041740 41968374 ~ 41969317 (+)
G144661 NA other downstream 1583696 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2804238 43730872 ~ 43731218 (+)
G146091 NA other downstream 2842073 43768707 ~ 43769162 (+)

Expression


Co-expression Network