G142745


Basic Information

Item Value
gene id G142745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40950499 ~ 40950726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU163950
AGATGAACACTACTCCAGAGTTTGGAAATACTGTATGATCTATTCAATCTTTTTCTATGCTTCAGAAAATGTGCATTTGAGCAACCAGGCTGTCTTAACAGCATTTCTGATATATTTGTCAAGTTATGTATATGGGCTTCTGGGTGGGCAGTTAGACCTACCGAGTAGTTGTCTTTCTTGGCAGTCATGTTGGTGTTGCGGTCACTCCAGTCGTAgttgacctcctcc

Function

NR:

description
plectin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163950 True 228 lncRNA 0.42 1 40950499 40950726

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 65359 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 102740 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 297117 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 631236 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 725167 40115958 ~ 40292372 (+)
LOC110489815 LOC106605058 coding downstream 343955 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 503533 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 588514 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 743711 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 779959 41730685 ~ 41741910 (+)
G142743 NA non-coding upstream 1095 40949138 ~ 40949404 (+)
G142741 NA non-coding upstream 2772 40947525 ~ 40947727 (+)
G142740 NA non-coding upstream 3681 40945806 ~ 40946818 (+)
G142739 NA non-coding upstream 7011 40943071 ~ 40943488 (+)
G142738 NA non-coding upstream 7822 40942241 ~ 40942677 (+)
G142746 NA non-coding downstream 599 40951325 ~ 40951575 (+)
G142751 NA non-coding downstream 7613 40958339 ~ 40958570 (+)
G142752 NA non-coding downstream 8444 40959170 ~ 40960343 (+)
G142753 NA non-coding downstream 9753 40960479 ~ 40960684 (+)
G142754 NA non-coding downstream 10969 40961695 ~ 40961914 (+)
G139179 NA other upstream 2898755 38051359 ~ 38051744 (+)
G139101 NA other upstream 3006487 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3009785 37919735 ~ 37940714 (+)
G139004 NA other upstream 3126489 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4548528 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 1017648 41968374 ~ 41969317 (+)
G144661 NA other downstream 1559604 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2780146 43730872 ~ 43731218 (+)
G146091 NA other downstream 2817981 43768707 ~ 43769162 (+)

Expression


Co-expression Network