G142746


Basic Information

Item Value
gene id G142746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40951325 ~ 40951575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU163951
TCCACGGTCTGGTGCAGGCCCCGGTGGCTGCCCAGCTGAGACTCCACGGTGGGCAGGTCCGAGCCCCACTCGGCCTCGTCAATCCGCCTCTGACTCTCCTCCACCCAGGTCAGCAGGTCCTGGGCGTAGCGCAGGGTCACCTCGTCCATCTCAGGACGCGCCCTGGTGGAGGGCTGCTGGATGGACTGGATCATCTGCGACTTGAGGCGCAGGTTATAATCGGTGCGCAGGTTCACAAGACGCTCGTGAAG

Function

NR:

description
plectin-like isoform X14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163951 True 251 lncRNA 0.65 1 40951325 40951575

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 66185 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 103566 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 297943 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 632062 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 725993 40115958 ~ 40292372 (+)
LOC110489815 LOC106605058 coding downstream 343106 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 502684 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 587665 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 742862 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 779110 41730685 ~ 41741910 (+)
G142745 NA non-coding upstream 599 40950499 ~ 40950726 (+)
G142743 NA non-coding upstream 1921 40949138 ~ 40949404 (+)
G142741 NA non-coding upstream 3598 40947525 ~ 40947727 (+)
G142740 NA non-coding upstream 4507 40945806 ~ 40946818 (+)
G142739 NA non-coding upstream 7837 40943071 ~ 40943488 (+)
G142751 NA non-coding downstream 6764 40958339 ~ 40958570 (+)
G142752 NA non-coding downstream 7595 40959170 ~ 40960343 (+)
G142753 NA non-coding downstream 8904 40960479 ~ 40960684 (+)
G142754 NA non-coding downstream 10120 40961695 ~ 40961914 (+)
G142809 NA non-coding downstream 84280 41035855 ~ 41036321 (+)
G139179 NA other upstream 2899581 38051359 ~ 38051744 (+)
G139101 NA other upstream 3007313 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3010611 37919735 ~ 37940714 (+)
G139004 NA other upstream 3127315 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4549354 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 1016799 41968374 ~ 41969317 (+)
G144661 NA other downstream 1558755 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2779297 43730872 ~ 43731218 (+)
G146091 NA other downstream 2817132 43768707 ~ 43769162 (+)

Expression


Co-expression Network