G142753


Basic Information

Item Value
gene id G142753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40960479 ~ 40960684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU163960
TTTTAGGCCTCCGCCTAAACTTTGAGAGACCACAGACATGTCTCCACTCATCCACTCTCATATTCATGTCTACATGTAACTGTATGCTTCAACAGTGACTAAAGCAGCTCCGAGGCCATTGTAATACTAACAGAAGGACTGAGAACTCATCTAGTCACTCCTCTAGTCCAGGGCTCCCTAAAAAAAGGATTCCTAtacattttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163960 True 206 lncRNA 0.42 1 40960479 40960684

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 75339 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 112720 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 307097 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 641216 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 735147 40115958 ~ 40292372 (+)
LOC110489815 LOC106605058 coding downstream 333997 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 493575 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 578556 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 733753 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 770001 41730685 ~ 41741910 (+)
G142752 NA non-coding upstream 136 40959170 ~ 40960343 (+)
G142751 NA non-coding upstream 1909 40958339 ~ 40958570 (+)
G142746 NA non-coding upstream 8904 40951325 ~ 40951575 (+)
G142745 NA non-coding upstream 9753 40950499 ~ 40950726 (+)
G142743 NA non-coding upstream 11075 40949138 ~ 40949404 (+)
G142754 NA non-coding downstream 1011 40961695 ~ 40961914 (+)
G142809 NA non-coding downstream 75171 41035855 ~ 41036321 (+)
G142844 NA non-coding downstream 124419 41085103 ~ 41085319 (+)
G142845 NA non-coding downstream 128016 41088700 ~ 41088899 (+)
G142846 NA non-coding downstream 128763 41089447 ~ 41089865 (+)
G139179 NA other upstream 2908735 38051359 ~ 38051744 (+)
G139101 NA other upstream 3016467 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3019765 37919735 ~ 37940714 (+)
G139004 NA other upstream 3136469 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4558508 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 1007690 41968374 ~ 41969317 (+)
G144661 NA other downstream 1549646 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2770188 43730872 ~ 43731218 (+)
G146091 NA other downstream 2808023 43768707 ~ 43769162 (+)

Expression


Co-expression Network