G142754


Basic Information

Item Value
gene id G142754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 40961695 ~ 40961914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU163961
gttttgtcatgctgaaacaggaaggggacttccccaaaatgttgccacaaagttggaagcacaaaatcgtctagaatgtcattgtatgctgtagcgttaacatttcccttcactgaaactaaggggcctagcccgaaccatgaaaaacagccccagaccattatgcctcctccaccaaactttacagttggtactatgcattggggcaggtagcgttctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163961 True 220 lncRNA 0.46 1 40961695 40961914

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 76555 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 113936 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 308313 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 642432 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 736363 40115958 ~ 40292372 (+)
LOC110489815 LOC106605058 coding downstream 332767 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 492345 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 577326 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 732523 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 768771 41730685 ~ 41741910 (+)
G142753 NA non-coding upstream 1011 40960479 ~ 40960684 (+)
G142752 NA non-coding upstream 1352 40959170 ~ 40960343 (+)
G142751 NA non-coding upstream 3125 40958339 ~ 40958570 (+)
G142746 NA non-coding upstream 10120 40951325 ~ 40951575 (+)
G142745 NA non-coding upstream 10969 40950499 ~ 40950726 (+)
G142809 NA non-coding downstream 73941 41035855 ~ 41036321 (+)
G142844 NA non-coding downstream 123189 41085103 ~ 41085319 (+)
G142845 NA non-coding downstream 126786 41088700 ~ 41088899 (+)
G142846 NA non-coding downstream 127533 41089447 ~ 41089865 (+)
G142850 NA non-coding downstream 132896 41094810 ~ 41095065 (+)
G139179 NA other upstream 2909951 38051359 ~ 38051744 (+)
G139101 NA other upstream 3017683 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3020981 37919735 ~ 37940714 (+)
G139004 NA other upstream 3137685 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4559724 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 1006460 41968374 ~ 41969317 (+)
G144661 NA other downstream 1548416 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2768958 43730872 ~ 43731218 (+)
G146091 NA other downstream 2806793 43768707 ~ 43769162 (+)

Expression


Co-expression Network