G142809


Basic Information

Item Value
gene id G142809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 41035855 ~ 41036321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU164019
ctgcatggcggtggaaggtttacgatctccagccccaggctcaggtacccctcattcaggccatggAGGACGCCTGTGACCAAGTCCACGCCGCAGCTGTGCAAGGATGGATTCGACATTCAAGACGGTTCTTCCCGCGTTGTCTTGCTAATGACGATATTGCTTGTGATGTTGATGAAATTCTCTGGCCAGATCCAGCTAGGCGAAGAGAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107666909

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164019 True 212 lncRNA 0.54 2 41035855 41036321

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 150715 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 188096 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 382473 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 716592 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 810523 40115958 ~ 40292372 (+)
LOC110489815 LOC106605058 coding downstream 258360 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 417938 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 502919 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 658116 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 694364 41730685 ~ 41741910 (+)
G142754 NA non-coding upstream 73941 40961695 ~ 40961914 (+)
G142753 NA non-coding upstream 75171 40960479 ~ 40960684 (+)
G142752 NA non-coding upstream 75512 40959170 ~ 40960343 (+)
G142751 NA non-coding upstream 77285 40958339 ~ 40958570 (+)
G142746 NA non-coding upstream 84280 40951325 ~ 40951575 (+)
G142844 NA non-coding downstream 48782 41085103 ~ 41085319 (+)
G142845 NA non-coding downstream 52379 41088700 ~ 41088899 (+)
G142846 NA non-coding downstream 53126 41089447 ~ 41089865 (+)
G142850 NA non-coding downstream 58489 41094810 ~ 41095065 (+)
G142858 NA non-coding downstream 69474 41105795 ~ 41106093 (+)
G139179 NA other upstream 2984111 38051359 ~ 38051744 (+)
G139101 NA other upstream 3091843 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3095141 37919735 ~ 37940714 (+)
G139004 NA other upstream 3211845 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4633884 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 932053 41968374 ~ 41969317 (+)
G144661 NA other downstream 1474009 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2694551 43730872 ~ 43731218 (+)
G146091 NA other downstream 2732386 43768707 ~ 43769162 (+)

Expression


Co-expression Network