G143121


Basic Information

Item Value
gene id G143121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 41238892 ~ 41324218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU164356
CCTCAAGCAATAACACAATACACGTTTTCCATTTCAGCAGAGGATCCGCTTGCAAACCTTTTGTGGGAGGAAAACCTCAGACAATATGTAAAAACAAAATCGTGGAAGCATCCCTGCCAAAACCAATAGTGAACTTCTGCCTGTTTATTACTTTATTCTCGTGCAGTGACAGACATTGTGGTCAAAGGGTTGTTTGCGGCAAGTCTGGTATTGGTCTGGACATCCGACTAAAACAACACAGGAGAGTGCACTGGTAAGGTGAACGATAATTAAGGGCTAGGATAACTTATTTTCATGATGAGTCATGGCGAAGGACCGGTAAACCAATCACTTTATCCTCCCCGCTGGCCTGGTCCAAGGTGACGTCAGTGTTTGAATCGTCTGGCTCCGAGCCCCGAGTGCCATGGAAGCAGGAAGcacctcttcctttctctccagAGATGCAGCAGCCTATGGAAGTTTCAGTCTACCGAAGGACCACCAGTCACACACAAGAGTAGTCACCTACCTGAAACCATCTCCCCGTCGAGAACAAGGTAAAGTTGAGGTAAAGGGAAAGAAAGTTACATGAGAACACAGAAGCTGAAGGAAGAGTTGGTGAGAGCAGGAGggatgctgtcaaaaagtgattgactTAAACTGAATTTACCCTATAGGCCTGAGGTAAAGGGGGGTGTACTGTAGATCCTAAGTGGTACGATGGTCtgggtgagtgtgtgagtgtgtgtggtgggctCTGTTTGTGTTGGAAACAACCATTCCGCTGGCAAAAAGGGGGAGAAAAAATAAGTGAATGCTTCAGTGCTCGGCCCTTTTAGCCTGAGCGAGGGATTCCCCAGGAAGGGAGTGGTTTGCTCCCACTGCTATTCTGGGGGTCCCTCAAtcttctgtttaaaaaaatatatatatattatcttgTTGTGCTTTTCGTCTCTGAGCTGAGAGACGAGGTCTTGCCTGGCTGTAAATATTTGCATGTCACCACAGTTTCAGCTTTGTTTCTTCTCAGCACTGTTTATTTGTACATCTGCAATTGTGATTAATAAAAAACGAAAGGGAGTGAATGTAAGGGAACAAGATAACCGCAGTATTTTTGACTGGAACTGGAGTAAGGGTAATTCAATTTGTTTACCACCCCTGATCACCATGACTCGTTTATCGGTTATGTCGGAGTTGATGTGATAATTGAATTCCTGCACTGTCAGATTAAATAAATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164356 True 1218 lncRNA 0.45 2 41238892 41324218

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 353752 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 391133 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 585510 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 919629 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 1013560 40115958 ~ 40292372 (+)
LOC110489825 LOC106605056 coding downstream 130041 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 215022 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 370219 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 406467 41730685 ~ 41741910 (+)
LOC110489877 LOC106605051 coding downstream 425821 41750039 ~ 41826833 (+)
G143068 NA non-coding upstream 95320 41143302 ~ 41143572 (+)
G143066 NA non-coding upstream 100124 41134363 ~ 41138768 (+)
G143045 NA non-coding upstream 123360 41115263 ~ 41115532 (+)
G142864 NA non-coding upstream 126809 41111706 ~ 41112083 (+)
G142863 NA non-coding upstream 128533 41110135 ~ 41110359 (+)
G143225 NA non-coding downstream 52098 41376316 ~ 41376687 (+)
G143235 NA non-coding downstream 68212 41392430 ~ 41392645 (+)
G143236 NA non-coding downstream 70635 41394853 ~ 41395107 (+)
G143237 NA non-coding downstream 73082 41397300 ~ 41397637 (+)
G143739 NA non-coding downstream 345574 41669792 ~ 41670307 (+)
G139179 NA other upstream 3187148 38051359 ~ 38051744 (+)
G139101 NA other upstream 3294880 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3298178 37919735 ~ 37940714 (+)
G139004 NA other upstream 3414882 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4836921 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 644156 41968374 ~ 41969317 (+)
G144661 NA other downstream 1186112 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2406654 43730872 ~ 43731218 (+)
G146091 NA other downstream 2444489 43768707 ~ 43769162 (+)

Expression


Co-expression Network