G143235


Basic Information

Item Value
gene id G143235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 41392430 ~ 41392645 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU164474
gcctaaaatctgtggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaagatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcatgtttagcagaggggtcaaa

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164474 True 216 lncRNA 0.48 1 41392430 41392645

Neighbor

gene id symbol gene type direction distance location
LOC110489815 LOC106605058 coding upstream 37230 41294681 ~ 41355200 (+)
LOC110489783 LOC106605064 coding upstream 507290 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 544671 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 739048 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 1073167 40309178 ~ 40319263 (+)
LOC110489825 LOC106605056 coding downstream 61614 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 146595 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 301792 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 338040 41730685 ~ 41741910 (+)
LOC110489877 LOC106605051 coding downstream 357394 41750039 ~ 41826833 (+)
G143225 NA non-coding upstream 15743 41376316 ~ 41376687 (+)
G143121 NA non-coding upstream 68212 41238892 ~ 41324218 (+)
G143068 NA non-coding upstream 248858 41143302 ~ 41143572 (+)
G143066 NA non-coding upstream 253662 41134363 ~ 41138768 (+)
G143045 NA non-coding upstream 276898 41115263 ~ 41115532 (+)
G143236 NA non-coding downstream 2208 41394853 ~ 41395107 (+)
G143237 NA non-coding downstream 4655 41397300 ~ 41397637 (+)
G143739 NA non-coding downstream 277147 41669792 ~ 41670307 (+)
G143778 NA non-coding downstream 349728 41742373 ~ 41742549 (+)
G143779 NA non-coding downstream 350874 41743519 ~ 41743788 (+)
G139179 NA other upstream 3340686 38051359 ~ 38051744 (+)
G139101 NA other upstream 3448418 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3451716 37919735 ~ 37940714 (+)
G139004 NA other upstream 3568420 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4990459 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 575729 41968374 ~ 41969317 (+)
G144661 NA other downstream 1117685 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2338227 43730872 ~ 43731218 (+)
G146091 NA other downstream 2376062 43768707 ~ 43769162 (+)

Expression


Co-expression Network