G143778


Basic Information

Item Value
gene id G143778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 41742373 ~ 41742549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU165046
tgaccaagctttaacttcctgactgatgtcttgagatgttgcttcaatatatccacataattttccttgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacatgatgcaaccgtgcttcacggttgggatggtgttcttcgacttgcatgcctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165046 True 177 lncRNA 0.47 1 41742373 41742549

Neighbor

gene id symbol gene type direction distance location
LOC110489869 LOC106605052 coding upstream 463 41730685 ~ 41741910 (+)
LOC110489853 sybu coding upstream 31583 41694437 ~ 41710790 (+)
LOC110489834 eny2 coding upstream 200719 41539240 ~ 41541654 (+)
LOC110489825 LOC106605056 coding upstream 281465 41454259 ~ 41460908 (+)
LOC110489815 LOC106605058 coding upstream 387173 41294681 ~ 41355200 (+)
LOC110489877 LOC106605051 coding downstream 7490 41750039 ~ 41826833 (+)
LOC110489902 LOC106605050 coding downstream 294951 42037500 ~ 42039843 (+)
LOC110489918 NA coding downstream 324455 42067004 ~ 42092073 (+)
LOC110489908 LOC106605043 coding downstream 357741 42100290 ~ 42141745 (+)
LOC110489919 LOC106605045 coding downstream 407781 42139048 ~ 42220203 (+)
G143739 NA non-coding upstream 72066 41669792 ~ 41670307 (+)
G143237 NA non-coding upstream 344736 41397300 ~ 41397637 (+)
G143236 NA non-coding upstream 347266 41394853 ~ 41395107 (+)
G143235 NA non-coding upstream 349728 41392430 ~ 41392645 (+)
G143225 NA non-coding upstream 365686 41376316 ~ 41376687 (+)
G143779 NA non-coding downstream 970 41743519 ~ 41743788 (+)
G143840 NA non-coding downstream 50164 41792713 ~ 41838218 (+)
G143860 LOC107662719 non-coding downstream 101426 41843975 ~ 41844344 (+)
G143940 NA non-coding downstream 229376 41971925 ~ 41972187 (+)
G143950 NA non-coding downstream 252393 41994942 ~ 41996046 (+)
G139179 NA other upstream 3690629 38051359 ~ 38051744 (+)
G139101 NA other upstream 3798361 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3801659 37919735 ~ 37940714 (+)
G139004 NA other upstream 3918363 37777061 ~ 37824010 (+)
G143938 LOC106605049 other downstream 225825 41968374 ~ 41969317 (+)
G144661 NA other downstream 767781 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 1988323 43730872 ~ 43731218 (+)
G146091 NA other downstream 2026158 43768707 ~ 43769162 (+)
G146114 NA other downstream 2056855 43799404 ~ 43799853 (+)

Expression


Co-expression Network