Gene
RNA
| Item | Value |
|---|---|
| gene id | G143779 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 41743519 ~ 41743788 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU165047 | True | 270 | lncRNA | 0.38 | 1 | 41743519 | 41743788 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489869 | LOC106605052 | coding | upstream | 1609 | 41730685 ~ 41741910 (+) |
| LOC110489853 | sybu | coding | upstream | 32729 | 41694437 ~ 41710790 (+) |
| LOC110489834 | eny2 | coding | upstream | 201865 | 41539240 ~ 41541654 (+) |
| LOC110489825 | LOC106605056 | coding | upstream | 282611 | 41454259 ~ 41460908 (+) |
| LOC110489815 | LOC106605058 | coding | upstream | 388319 | 41294681 ~ 41355200 (+) |
| LOC110489877 | LOC106605051 | coding | downstream | 6251 | 41750039 ~ 41826833 (+) |
| LOC110489902 | LOC106605050 | coding | downstream | 293712 | 42037500 ~ 42039843 (+) |
| LOC110489918 | NA | coding | downstream | 323216 | 42067004 ~ 42092073 (+) |
| LOC110489908 | LOC106605043 | coding | downstream | 356502 | 42100290 ~ 42141745 (+) |
| LOC110489919 | LOC106605045 | coding | downstream | 406542 | 42139048 ~ 42220203 (+) |
| G143778 | NA | non-coding | upstream | 970 | 41742373 ~ 41742549 (+) |
| G143739 | NA | non-coding | upstream | 73212 | 41669792 ~ 41670307 (+) |
| G143237 | NA | non-coding | upstream | 345882 | 41397300 ~ 41397637 (+) |
| G143236 | NA | non-coding | upstream | 348412 | 41394853 ~ 41395107 (+) |
| G143235 | NA | non-coding | upstream | 350874 | 41392430 ~ 41392645 (+) |
| G143840 | NA | non-coding | downstream | 48925 | 41792713 ~ 41838218 (+) |
| G143860 | LOC107662719 | non-coding | downstream | 100187 | 41843975 ~ 41844344 (+) |
| G143940 | NA | non-coding | downstream | 228137 | 41971925 ~ 41972187 (+) |
| G143950 | NA | non-coding | downstream | 251154 | 41994942 ~ 41996046 (+) |
| G143953 | LOC106605044 | non-coding | downstream | 258663 | 42002451 ~ 42003243 (+) |
| G139179 | NA | other | upstream | 3691775 | 38051359 ~ 38051744 (+) |
| G139101 | NA | other | upstream | 3799507 | 37943742 ~ 37944012 (+) |
| G139089 | LOC106605123 | other | upstream | 3802805 | 37919735 ~ 37940714 (+) |
| G139004 | NA | other | upstream | 3919509 | 37777061 ~ 37824010 (+) |
| G143938 | LOC106605049 | other | downstream | 224586 | 41968374 ~ 41969317 (+) |
| G144661 | NA | other | downstream | 766542 | 42510330 ~ 42566030 (+) |
| G146054 | LOC100136012 | other | downstream | 1987084 | 43730872 ~ 43731218 (+) |
| G146091 | NA | other | downstream | 2024919 | 43768707 ~ 43769162 (+) |
| G146114 | NA | other | downstream | 2055616 | 43799404 ~ 43799853 (+) |
