Gene
RNA
| Item | Value |
|---|---|
| gene id | G144459 |
| gene name | LOC106605045 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 42184844 ~ 42186118 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| clathrin coat assembly protein AP180-like isoform X7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU165794 | True | 218 | lncRNA | 0.47 | 3 | 42184844 | 42186118 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501561 | LOC106605047 | coding | downstream | 84549 | 42085411 ~ 42100295 (-) |
| LOC110489894 | LOC106605044 | coding | downstream | 154003 | 41994937 ~ 42030841 (-) |
| LOC110489886 | LOC106605049 | coding | downstream | 214894 | 41963722 ~ 41969950 (-) |
| LOC110489860 | LOC106605053 | coding | downstream | 454337 | 41714269 ~ 41730507 (-) |
| LOC110489843 | LOC106605054 | coding | downstream | 497311 | 41679632 ~ 41687533 (-) |
| LOC110489954 | LOC106605048 | coding | upstream | 31529 | 42217647 ~ 42223758 (-) |
| LOC118940237 | NA | coding | upstream | 127973 | 42314091 ~ 42340473 (-) |
| LOC110489971 | LOC106605027 | coding | upstream | 309348 | 42495466 ~ 42501897 (-) |
| LOC110489980 | LOC106605028 | coding | upstream | 324204 | 42510322 ~ 42517281 (-) |
| LOC118936750 | NA | coding | upstream | 500021 | 42686139 ~ 42687000 (-) |
| G144428 | NA | non-coding | downstream | 46274 | 42138359 ~ 42138570 (-) |
| G144427 | LOC106605043 | non-coding | downstream | 46677 | 42136690 ~ 42138167 (-) |
| G144426 | NA | non-coding | downstream | 48267 | 42136370 ~ 42136577 (-) |
| G144425 | NA | non-coding | downstream | 49416 | 42135201 ~ 42135428 (-) |
| G144424 | NA | non-coding | downstream | 50100 | 42134160 ~ 42134744 (-) |
| G144496 | NA | non-coding | upstream | 61773 | 42247891 ~ 42250028 (-) |
| G144604 | NA | non-coding | upstream | 200225 | 42386343 ~ 42386574 (-) |
| G144609 | NA | non-coding | upstream | 202518 | 42388636 ~ 42388837 (-) |
| G144621 | NA | non-coding | upstream | 211783 | 42397901 ~ 42398150 (-) |
| G144654 | NA | non-coding | upstream | 227599 | 42413717 ~ 42414002 (-) |
| G142918 | NA | other | downstream | 1321123 | 40863214 ~ 40863721 (-) |
| LOC110489653 | LOC106605072 | other | downstream | 1943440 | 40224622 ~ 40298333 (-) |
| G141363 | LOC106605077 | other | downstream | 2419371 | 39763933 ~ 39765473 (-) |
| G140879 | NA | other | downstream | 3120426 | 39063862 ~ 39064418 (-) |
| G145010 | NA | other | upstream | 520700 | 42706818 ~ 42707279 (-) |
| G145767 | NA | other | upstream | 1084599 | 43270717 ~ 43272516 (-) |
| LOC110490183 | LOC106605015 | other | upstream | 1186722 | 43372725 ~ 43392160 (-) |
| LOC110490298 | LOC106605170 | other | upstream | 1589945 | 43776063 ~ 43783884 (-) |
| LOC110490352 | NA | other | upstream | 2248672 | 44434790 ~ 44464449 (-) |
