G144496


Basic Information

Item Value
gene id G144496
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42247891 ~ 42250028 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU165833
tgtatacactaccgttcaaaagtttggtcacttagaaatgtccttgatgtcaaattgatcagaaatacagtgtagatgttgtaaattactattgtagctggaaatggctgatttaaaaaaaattgagactgggacagagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaaaggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatttcagtctcttgatgtgcaaaactgatcgagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaaggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165833 True 457 lncRNA 0.39 2 42247891 42250028

Neighbor

gene id symbol gene type direction distance location
LOC110489954 LOC106605048 coding downstream 24133 42217647 ~ 42223758 (-)
LOC110501561 LOC106605047 coding downstream 147596 42085411 ~ 42100295 (-)
LOC110489894 LOC106605044 coding downstream 217050 41994937 ~ 42030841 (-)
LOC110489886 LOC106605049 coding downstream 277941 41963722 ~ 41969950 (-)
LOC110489860 LOC106605053 coding downstream 517384 41714269 ~ 41730507 (-)
LOC118940237 NA coding upstream 64063 42314091 ~ 42340473 (-)
LOC110489971 LOC106605027 coding upstream 245438 42495466 ~ 42501897 (-)
LOC110489980 LOC106605028 coding upstream 260294 42510322 ~ 42517281 (-)
LOC118936750 NA coding upstream 436111 42686139 ~ 42687000 (-)
LOC110490045 LOC106605033 coding upstream 474050 42724078 ~ 42727549 (-)
G144459 LOC106605045 non-coding downstream 61773 42184844 ~ 42186118 (-)
G144428 NA non-coding downstream 109321 42138359 ~ 42138570 (-)
G144427 LOC106605043 non-coding downstream 109724 42136690 ~ 42138167 (-)
G144426 NA non-coding downstream 111314 42136370 ~ 42136577 (-)
G144425 NA non-coding downstream 112463 42135201 ~ 42135428 (-)
G144604 NA non-coding upstream 136315 42386343 ~ 42386574 (-)
G144609 NA non-coding upstream 138608 42388636 ~ 42388837 (-)
G144621 NA non-coding upstream 147873 42397901 ~ 42398150 (-)
G144654 NA non-coding upstream 163689 42413717 ~ 42414002 (-)
G144941 NA non-coding upstream 338530 42588558 ~ 42592604 (-)
G142918 NA other downstream 1384170 40863214 ~ 40863721 (-)
LOC110489653 LOC106605072 other downstream 2006487 40224622 ~ 40298333 (-)
G141363 LOC106605077 other downstream 2482418 39763933 ~ 39765473 (-)
G140879 NA other downstream 3183473 39063862 ~ 39064418 (-)
G145010 NA other upstream 456790 42706818 ~ 42707279 (-)
G145767 NA other upstream 1020689 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 1122812 43372725 ~ 43392160 (-)
LOC110490298 LOC106605170 other upstream 1526035 43776063 ~ 43783884 (-)
LOC110490352 NA other upstream 2184762 44434790 ~ 44464449 (-)

Expression


Co-expression Network