G144176


Basic Information

Item Value
gene id G144176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42385198 ~ 42385672 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU165482
tttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcattatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgtttaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165482 True 475 lncRNA 0.38 1 42385198 42385672

Neighbor

gene id symbol gene type direction distance location
LOC110489963 LOC106583951 coding upstream 1241 42251937 ~ 42383957 (+)
LOC110489919 LOC106605045 coding upstream 167423 42139048 ~ 42220203 (+)
LOC110489908 LOC106605043 coding upstream 243453 42100290 ~ 42141745 (+)
LOC110489918 NA coding upstream 293125 42067004 ~ 42092073 (+)
LOC110489902 LOC106605050 coding upstream 345355 42037500 ~ 42039843 (+)
LOC110489991 LOC106605026 coding downstream 143409 42529081 ~ 42572673 (+)
LOC110489996 pnisr coding downstream 196687 42582359 ~ 42592552 (+)
LOC110490015 LOC106605038 coding downstream 208260 42593932 ~ 42616488 (+)
LOC110490022 LOC106605035 coding downstream 232030 42617702 ~ 42642160 (+)
LOC110490029 LOC106605030 coding downstream 278752 42664424 ~ 42683349 (+)
G144034 NA non-coding upstream 246184 42138760 ~ 42139014 (+)
G144017 NA non-coding upstream 294283 42090612 ~ 42090915 (+)
G144016 NA non-coding upstream 295668 42089290 ~ 42089530 (+)
G144012 NA non-coding upstream 301084 42083621 ~ 42084114 (+)
G144629 NA non-coding downstream 16226 42401898 ~ 42402244 (+)
G144634 NA non-coding downstream 19205 42404877 ~ 42405121 (+)
G144706 NA non-coding downstream 98169 42483841 ~ 42486432 (+)
G144751 NA non-coding downstream 179880 42565552 ~ 42607102 (+)
G144731 NA non-coding downstream 256531 42642203 ~ 42643938 (+)
G143938 LOC106605049 other upstream 415881 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 843607 41539240 ~ 41541654 (+)
G139179 NA other upstream 4333454 38051359 ~ 38051744 (+)
G139101 NA other upstream 4441186 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 4444484 37919735 ~ 37940714 (+)
G144661 NA other downstream 124658 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 1345200 43730872 ~ 43731218 (+)
G146091 NA other downstream 1383035 43768707 ~ 43769162 (+)
G146114 NA other downstream 1413732 43799404 ~ 43799853 (+)
G146165 NA other downstream 1500924 43886596 ~ 43889609 (+)

Expression


Co-expression Network