G144706


Basic Information

Item Value
gene id G144706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42483841 ~ 42486432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166062
GAGTTTCCCAGCCGTAGCCTGCCTAGGCTATATGTCCGTGatctaaatcaaatcaagGGCAACTACTATCGCCAACAGTTCAACTGAGTATACTGGCAGTTCATGTGTTAGTCTTCTACATATCTTCACATCAAATTCAGAAACGTAAACACCTGCTTCTGTGCGCCCACTATCTGGGTCCTTGGATCCATCTGTGAAAGTGGTTAGATCAAGAACAGGATCTGGGAGTAACCATGGAGGAACATTCCCTATCATCACAGAAGGGCCAACCTCTAACTCCTTCAAACCACTCTCATCAGCAAGCTTTCCAACTGTCCAACTAAAACCACTGCCTTGTCTATTAGTATTCCCAACAGTCATCTAGAACTGTAGCAGTGGGATGCTCAACCTCACAGCCTTTCAACCTAACCCAATAatctaattattttttttacgcCATATATCCAAAGGCATCTCACCTGCTTCCACTATTAAGACGCATACAGATGTTAATTCACCAGATGTTGATTCACCAATTCATATccttaaagtattcagaccccttaactttttccacattttattatgctacagccttattctaaaatggattaaatcattttttaccttatcaaaaac
>TU166065
GAGTTTCCCAGCCGTAGCCTGCCTAGGCTATATGTCCGTGatctaaatcaaatcaagAATGTGCTGGAAATCTCATTACTACACACATTCTCTCAATTCTCCATAATAACATGAATACCTCCAATGGGCAACTACTATCGCCAACAGTTCAACTGAGTATACTGGCAGTTCATGTGTTAGTCTTCTACATATCTTCACATCAAATTCAGAAACGTAAACACCTGCTTCTGTGCGCCCACTATCTGGGTCCTTGGATCCATCTGTGAAAGTGGTTAGATCAAGAACAGGATCTGGGAGTAACCATGGAGGAACATTCCCTATCATCACAGAAGGGCCAACCTCTAACTCCTTCAAACCACTCTCATCAGCAAGCTTTCCAACTGTCCAACTAAAACCACTGCCTTGTCTATTAGTATTCCCAACAGTCATCTAGAACTGTAGCAGTGGGATGCTCAACCTCACAGCCTTTCAACCTAACCCAATAatctaattattttttttacgcCATATATCCAAAGGCATCTCACCTGCTTCCACTATTAAGACGCATACAGATGTTAATTCACCAGATGTTGATTCACCAATTCATATccttaaagtattcagaccccttaactttttccacattttattatgctacagccttattctaaaatggattaaatcattttttaccttatcaaaaac

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU166062 False 618 lncRNA 0.40 3 42483841 42486432
TU166065 True 687 lncRNA 0.40 4 42483841 42486432

Neighbor

gene id symbol gene type direction distance location
LOC110489963 LOC106583951 coding upstream 99884 42251937 ~ 42383957 (+)
LOC110489919 LOC106605045 coding upstream 266066 42139048 ~ 42220203 (+)
LOC110489908 LOC106605043 coding upstream 342096 42100290 ~ 42141745 (+)
LOC110489918 NA coding upstream 391768 42067004 ~ 42092073 (+)
LOC110489902 LOC106605050 coding upstream 443998 42037500 ~ 42039843 (+)
LOC110489991 LOC106605026 coding downstream 42649 42529081 ~ 42572673 (+)
LOC110489996 pnisr coding downstream 95927 42582359 ~ 42592552 (+)
LOC110490015 LOC106605038 coding downstream 107500 42593932 ~ 42616488 (+)
LOC110490022 LOC106605035 coding downstream 131270 42617702 ~ 42642160 (+)
LOC110490029 LOC106605030 coding downstream 177992 42664424 ~ 42683349 (+)
G144634 NA non-coding upstream 78720 42404877 ~ 42405121 (+)
G144629 NA non-coding upstream 81597 42401898 ~ 42402244 (+)
G144176 NA non-coding upstream 98169 42385198 ~ 42385672 (+)
G144034 NA non-coding upstream 344827 42138760 ~ 42139014 (+)
G144751 NA non-coding downstream 79120 42565552 ~ 42607102 (+)
G144731 NA non-coding downstream 155771 42642203 ~ 42643938 (+)
G144812 NA non-coding downstream 245498 42731930 ~ 42732135 (+)
G145043 NA non-coding downstream 274549 42760981 ~ 42761299 (+)
G145044 NA non-coding downstream 275769 42762201 ~ 42762510 (+)
G143938 LOC106605049 other upstream 514524 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 942250 41539240 ~ 41541654 (+)
G139179 NA other upstream 4432097 38051359 ~ 38051744 (+)
G139101 NA other upstream 4539829 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 4543127 37919735 ~ 37940714 (+)
G144661 NA other downstream 23898 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 1244440 43730872 ~ 43731218 (+)
G146091 NA other downstream 1282275 43768707 ~ 43769162 (+)
G146114 NA other downstream 1312972 43799404 ~ 43799853 (+)
G146165 NA other downstream 1400164 43886596 ~ 43889609 (+)

Expression


Co-expression Network