G145044


Basic Information

Item Value
gene id G145044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42762201 ~ 42762510 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166511
AAAATGTTAGGGgacctctttctctctatgaGGAGGTCTCATTAGTGAGACAAAAAGTCAAAGTCACCTTCTATTGATCATTTACATTTTCCTAGATATGTCTCCTTGTATAAAGGGATGTGCGCTCCGTCAGTTCAGTGAGTGATAGGCCCAGTGACTGACGTCATTTTGCTGCCCAATCTCCCCGCTCTTGcactctctcaattcaataaatgctttattggcatgaatgGATGGTTGCTACGGTTGCCAAAGCAATAGATATTAAGtatttaataaatgaataatctttctctctctctacccccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166511 True 310 lncRNA 0.41 1 42762201 42762510

Neighbor

gene id symbol gene type direction distance location
LOC110490029 LOC106605030 coding upstream 78852 42664424 ~ 42683349 (+)
LOC110490022 LOC106605035 coding upstream 120041 42617702 ~ 42642160 (+)
LOC110490015 LOC106605038 coding upstream 145713 42593932 ~ 42616488 (+)
LOC110489996 pnisr coding upstream 169649 42582359 ~ 42592552 (+)
LOC110489991 LOC106605026 coding upstream 189528 42529081 ~ 42572673 (+)
LOC110533774 NA coding downstream 113714 42876224 ~ 42877363 (+)
LOC110501569 mms22l coding downstream 115703 42878213 ~ 42910743 (+)
LOC110490056 LOC106605039 coding downstream 208505 42971015 ~ 42975154 (+)
LOC110490064 LOC106605040 coding downstream 212890 42975400 ~ 42978004 (+)
LOC100301866 LOC106584110 coding downstream 262890 43025400 ~ 43042479 (+)
G145043 NA non-coding upstream 902 42760981 ~ 42761299 (+)
G144812 NA non-coding upstream 30066 42731930 ~ 42732135 (+)
G144731 NA non-coding upstream 118263 42642203 ~ 42643938 (+)
G144751 NA non-coding upstream 155099 42565552 ~ 42607102 (+)
G144706 NA non-coding upstream 275769 42483841 ~ 42486432 (+)
G145045 NA non-coding downstream 3596 42766106 ~ 42766418 (+)
G145191 NA non-coding downstream 132922 42895432 ~ 42895766 (+)
G145211 NA non-coding downstream 167592 42930102 ~ 42933210 (+)
G145224 NA non-coding downstream 186411 42948921 ~ 42949201 (+)
G145271 NA non-coding downstream 260473 43022983 ~ 43023204 (+)
G144661 NA other upstream 196171 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 792884 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1220610 41539240 ~ 41541654 (+)
G139179 NA other upstream 4710457 38051359 ~ 38051744 (+)
G139101 NA other upstream 4818189 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 968362 43730872 ~ 43731218 (+)
G146091 NA other downstream 1006197 43768707 ~ 43769162 (+)
G146114 NA other downstream 1036894 43799404 ~ 43799853 (+)
G146165 NA other downstream 1124086 43886596 ~ 43889609 (+)
G146226 NA other downstream 1234270 43996780 ~ 43997065 (+)

Expression


Co-expression Network