G145211


Basic Information

Item Value
gene id G145211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42930102 ~ 42933210 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166681
CTCAGACTCGCTATCTCTTGCTGTCTCGcacgcgctctctctcgcacgctctctctctgtctcccatgcgctctctctctctgttttgcatgtgctctctctctcacgcgctctctctcacgctccctctctctctcgcaggtGCCGTCTCTCTCGCAcgcgccgtctctctctctctcgcacgtgttctctcactctctctcactctcatgcGCTCTCACgtgctctcactctgtctctctcacgctgtctccccctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166681 True 265 lncRNA 0.40 2 42930102 42933210

Neighbor

gene id symbol gene type direction distance location
LOC110501569 mms22l coding upstream 19359 42878213 ~ 42910743 (+)
LOC110533774 NA coding upstream 52739 42876224 ~ 42877363 (+)
LOC110490029 LOC106605030 coding upstream 246753 42664424 ~ 42683349 (+)
LOC110490022 LOC106605035 coding upstream 287942 42617702 ~ 42642160 (+)
LOC110490015 LOC106605038 coding upstream 313614 42593932 ~ 42616488 (+)
LOC110490056 LOC106605039 coding downstream 37805 42971015 ~ 42975154 (+)
LOC110490064 LOC106605040 coding downstream 42190 42975400 ~ 42978004 (+)
LOC100301866 LOC106584110 coding downstream 92190 43025400 ~ 43042479 (+)
LOC110490122 LOC106605034 coding downstream 157828 43091038 ~ 43097854 (+)
LOC110490166 LOC106605016 coding downstream 337456 43270666 ~ 43275284 (+)
G145191 NA non-coding upstream 34336 42895432 ~ 42895766 (+)
G145045 NA non-coding upstream 163684 42766106 ~ 42766418 (+)
G145044 NA non-coding upstream 167592 42762201 ~ 42762510 (+)
G145043 NA non-coding upstream 168803 42760981 ~ 42761299 (+)
G144812 NA non-coding upstream 197967 42731930 ~ 42732135 (+)
G145224 NA non-coding downstream 15711 42948921 ~ 42949201 (+)
G145271 NA non-coding downstream 89773 43022983 ~ 43023204 (+)
G145310 NA non-coding downstream 155604 43088814 ~ 43089105 (+)
G145313 NA non-coding downstream 164729 43097939 ~ 43098562 (+)
G145315 NA non-coding downstream 165832 43099042 ~ 43099255 (+)
G144661 NA other upstream 364072 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 960785 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1388511 41539240 ~ 41541654 (+)
G139179 NA other upstream 4878358 38051359 ~ 38051744 (+)
G139101 NA other upstream 4986090 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 797662 43730872 ~ 43731218 (+)
G146091 NA other downstream 835497 43768707 ~ 43769162 (+)
G146114 NA other downstream 866194 43799404 ~ 43799853 (+)
G146165 NA other downstream 953386 43886596 ~ 43889609 (+)
G146226 NA other downstream 1063570 43996780 ~ 43997065 (+)

Expression


Co-expression Network