G145224



Basic Information


Item Value
gene id G145224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42948921 ~ 42949201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU166700
ACAGTTAACACTGCAGATGGCATTGCAAACTCTAAGAGCAAAATGAGTCACACCCGATTACAAAATGCTGGAAACTTTAGTAGGGCTGTGTGTATGATtcacttgtgtttgtgtgtgtgtgtgtgtatgattcaCTTGTGTTCGTGTGTGTATGATTCACTTGTGTTCGTGTGTGTATGATTCActtgtgttcatgtgtgtgtgtgtgtgtgtgtatgattcacttgtgttcgtgtgtgtgtgtgtgtatgattcaattgtgtttgtgtgtgtgtgtgtgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU166700 True 281 lncRNA 0.41 1 42948921 42949201

Neighbor


gene id symbol gene type direction distance location
LOC110501569 mms22l coding upstream 38178 42878213 ~ 42910743 (+)
LOC110533774 NA coding upstream 71558 42876224 ~ 42877363 (+)
LOC110490029 LOC106605030 coding upstream 265572 42664424 ~ 42683349 (+)
LOC110490022 LOC106605035 coding upstream 306761 42617702 ~ 42642160 (+)
LOC110490015 LOC106605038 coding upstream 332433 42593932 ~ 42616488 (+)
LOC110490056 LOC106605039 coding downstream 21814 42971015 ~ 42975154 (+)
LOC110490064 LOC106605040 coding downstream 26199 42975400 ~ 42978004 (+)
LOC100301866 LOC106584110 coding downstream 76199 43025400 ~ 43042479 (+)
LOC110490122 LOC106605034 coding downstream 141837 43091038 ~ 43097854 (+)
LOC110490166 LOC106605016 coding downstream 321465 43270666 ~ 43275284 (+)
G145211 NA non-coding upstream 15711 42930102 ~ 42933210 (+)
G145191 NA non-coding upstream 53155 42895432 ~ 42895766 (+)
G145045 NA non-coding upstream 182503 42766106 ~ 42766418 (+)
G145044 NA non-coding upstream 186411 42762201 ~ 42762510 (+)
G145043 NA non-coding upstream 187622 42760981 ~ 42761299 (+)
G145271 NA non-coding downstream 73782 43022983 ~ 43023204 (+)
G145310 NA non-coding downstream 139613 43088814 ~ 43089105 (+)
G145313 NA non-coding downstream 148738 43097939 ~ 43098562 (+)
G145315 NA non-coding downstream 149841 43099042 ~ 43099255 (+)
G145317 NA non-coding downstream 156055 43105256 ~ 43105481 (+)
G144661 NA other upstream 382891 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 979604 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1407330 41539240 ~ 41541654 (+)
G139179 NA other upstream 4897177 38051359 ~ 38051744 (+)
G139101 NA other upstream 5004909 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 781671 43730872 ~ 43731218 (+)
G146091 NA other downstream 819506 43768707 ~ 43769162 (+)
G146114 NA other downstream 850203 43799404 ~ 43799853 (+)
G146165 NA other downstream 937395 43886596 ~ 43889609 (+)
G146226 NA other downstream 1047579 43996780 ~ 43997065 (+)

Expression



Co-expression Network