G145310


Basic Information

Item Value
gene id G145310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43088814 ~ 43089105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166796
AACAAACACCGTAAAAGAAATATGCATGTCACTTGAACCAGTCTTTGGGAGGGAACAATTGATAGCGTACTTATCCACAACTGTTCCCGCATCGGCTTGAACAATCCAAACAAGAGCAGCAGTCCATTACACAACATCAGTTTATTTTGCGAACGCCCACCCTAGTTTAAGTCAAAGGTCACTTACACAGTTTAGAAAATCATATagcgggtgcagcgaaatgcttgttactagcgcctaacaatgcagtaaaatgccaaacagtgtgtgtgtgtggagcaggaaCTGAGTC

Function

NR:

description
PREDICTED: high mobility group protein B3 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166796 True 292 lncRNA 0.43 1 43088814 43089105

Neighbor

gene id symbol gene type direction distance location
LOC100301866 LOC106584110 coding upstream 46335 43025400 ~ 43042479 (+)
LOC110490064 LOC106605040 coding upstream 110810 42975400 ~ 42978004 (+)
LOC110490056 LOC106605039 coding upstream 113660 42971015 ~ 42975154 (+)
LOC110501569 mms22l coding upstream 178071 42878213 ~ 42910743 (+)
LOC110533774 NA coding upstream 211451 42876224 ~ 42877363 (+)
LOC110490122 LOC106605034 coding downstream 1933 43091038 ~ 43097854 (+)
LOC110490166 LOC106605016 coding downstream 181561 43270666 ~ 43275284 (+)
LOC110490176 NA coding downstream 262022 43351127 ~ 43353661 (+)
LOC110501584 NA coding downstream 462477 43551582 ~ 43558937 (+)
LOC110490199 NA coding downstream 481185 43570290 ~ 43596359 (+)
G145271 NA non-coding upstream 65610 43022983 ~ 43023204 (+)
G145224 NA non-coding upstream 139613 42948921 ~ 42949201 (+)
G145211 NA non-coding upstream 155604 42930102 ~ 42933210 (+)
G145191 NA non-coding upstream 193048 42895432 ~ 42895766 (+)
G145045 NA non-coding upstream 322396 42766106 ~ 42766418 (+)
G145313 NA non-coding downstream 8834 43097939 ~ 43098562 (+)
G145315 NA non-coding downstream 9937 43099042 ~ 43099255 (+)
G145317 NA non-coding downstream 16151 43105256 ~ 43105481 (+)
G145324 NA non-coding downstream 21904 43111009 ~ 43111274 (+)
G145328 NA non-coding downstream 29514 43118619 ~ 43118856 (+)
G144661 NA other upstream 522784 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1119497 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1547223 41539240 ~ 41541654 (+)
G139179 NA other upstream 5037070 38051359 ~ 38051744 (+)
G139101 NA other upstream 5144802 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 641767 43730872 ~ 43731218 (+)
G146091 NA other downstream 679602 43768707 ~ 43769162 (+)
G146114 NA other downstream 710299 43799404 ~ 43799853 (+)
G146165 NA other downstream 797491 43886596 ~ 43889609 (+)
G146226 NA other downstream 907675 43996780 ~ 43997065 (+)

Expression


Co-expression Network